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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00291 and ECD_00292 are separated by 336 nucleotides
ECD_00292 and ECD_00293 are separated by 108 nucleotides
ECD_00293 and ECD_00294 are separated by 30 nucleotides
ECD_00294 and ECD_00295 are separated by 32 nucleotides
ECD_00291: ECD_00291 - cytosine/isoguanine deaminase, at 325,706 to 326,989
_00291
ECD_00292: ECD_00292 - transcriptional activator of cyn operon; autorepressor, at 327,326 to 328,225
_00292
ECD_00293: ECD_00293 - carbonic anhydrase, at 328,334 to 328,993
_00293
ECD_00294: ECD_00294 - cyanate aminohydrolase, at 329,024 to 329,494
_00294
ECD_00295: ECD_00295 - putative cyanate transporter, at 329,527 to 330,681
_00295
Group
Condition
ECD
_00291
ECD
_00292
ECD
_00293
ECD
_00294
ECD
_00295
phage
Bas52
+0.0
-0.3
+0.0
-0.4
-0.5
phage
Laval1257
+0.1
-0.2
-0.4
-0.7
+0.3
phage
Bas41
+0.3
-0.3
-0.3
-0.1
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.8
+0.4
-0.5
+0.3
+0.0
phage
Bas69
+0.1
-0.1
+0.3
-0.3
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.7
-0.0
+0.2
+0.1
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.5
+0.2
-0.5
+0.2
+0.0
phage
EV116
-0.3
-0.6
+0.7
-0.2
-0.0
phage
Laval1261
-0.1
-0.3
+0.4
-0.1
-0.3
phage
Laval1259
+0.1
-0.9
+0.8
-0.0
-0.3
phage
Bas24
-0.1
-0.5
+0.4
-0.2
+0.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.7
+0.4
-0.2
+0.4
+0.0
nophagecontrol
NoPhageControl
-0.2
+0.4
-0.6
+0.5
-0.2
phage
P2_phage_0.5625_MOI
-0.5
+0.6
+0.1
-0.3
+0.0
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-1.3
+0.1
+0.6
+0.6
-0.1
phage
Bas06
+0.0
+0.3
-0.4
+0.2
-0.1
phage
Bas63
+0.4
+0.4
-0.2
-0.2
-0.5
phage
Laval1263
+0.3
+0.1
+0.3
-0.3
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.3
+0.3
-0.3
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.6
+0.6
-0.0
+0.2
-0.0
no phage control
Control_TnA
+0.3
+0.3
-0.4
-0.3
+0.2
phage
Laval1267
+0.1
-0.3
+0.2
-0.2
+0.4
phage
CM1
-0.1
+0.0
+0.9
+0.2
-0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.5
+0.6
-0.2
+0.4
-0.1
phage
Ste04
+0.3
+0.2
-0.4
-0.0
+0.2
phage
EV152
+0.2
-0.1
+0.3
-0.1
+0.4
phage
Bas30
+0.3
+0.2
+0.3
-0.3
+0.2
lb_plus_sm_buffer
NoPhageControl
-0.2
+0.6
-0.1
+0.2
+0.2
phage
EV116
+0.4
-0.1
+0.5
-0.0
+0.0
phage
Bas26
+0.2
+0.6
-0.0
+0.0
+0.3
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