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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00288 and ECD_00289 are separated by 39 nucleotides
ECD_00289 and ECD_00290 are separated by 235 nucleotides
ECD_00290 and ECD_00291 overlap by 11 nucleotides
ECD_00291 and ECD_00292 are separated by 336 nucleotides
ECD_00288: ECD_00288 - 2-methylcitrate dehydratase, at 320,844 to 322,295
_00288
ECD_00289: ECD_00289 - propionate--CoA ligase, at 322,335 to 324,221
_00289
ECD_00290: ECD_00290 - cytosine transporter, at 324,457 to 325,716
_00290
ECD_00291: ECD_00291 - cytosine/isoguanine deaminase, at 325,706 to 326,989
_00291
ECD_00292: ECD_00292 - transcriptional activator of cyn operon; autorepressor, at 327,326 to 328,225
_00292
Group
Condition
ECD
_00288
ECD
_00289
ECD
_00290
ECD
_00291
ECD
_00292
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.3
-0.1
-0.3
-1.3
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.2
-0.3
-0.2
-0.7
-0.0
phage
Laval1261
-0.2
-0.0
-0.2
-0.2
-0.4
phage
Laval1259
+0.0
+0.0
-0.0
+0.1
-0.9
phage
P2_phage_0.5625_MOI
-1.0
-0.1
+0.2
-0.5
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.1
-0.1
-0.3
-0.8
+0.4
carbon source
Casamino-acids
+0.1
-0.1
+0.1
-0.3
-0.4
stress
Tailocin 256
-0.1
-0.4
+0.3
-0.2
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.1
-0.1
-0.1
-0.7
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.4
-0.2
-0.1
-0.5
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.2
-0.2
-0.2
-0.6
+0.6
phage
EV116
+0.5
-0.1
+0.3
-0.3
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.2
+0.1
-0.2
-0.3
+0.3
no phage control
Control_TnJ
+0.4
-0.1
-0.1
-0.1
-0.2
phage
Bas24
+0.3
-0.0
+0.2
-0.1
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.1
-0.1
-0.1
-0.5
+0.6
phage
JK16
-0.1
-0.0
+0.2
+0.2
-0.4
phage
Laval1257
+0.5
-0.5
+0.1
+0.1
-0.2
phage
Bas26
+0.4
-0.1
+0.2
-0.1
-0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.3
+0.1
-0.3
phage
N4
+0.4
+0.0
+0.2
-0.2
-0.1
balo
Mixed culture, Halobacteriovorax-1
+0.3
-0.1
-0.2
-0.1
+0.4
phage
CM1
-0.2
+0.2
+0.5
-0.1
+0.0
phage
Bas41
+0.2
+0.1
+0.2
+0.3
-0.3
lb_plus_sm_buffer
NoPhageControl
-0.2
+0.2
-0.0
-0.2
+0.6
nophagecontrol
NoPhageControl
+0.4
-0.0
+0.1
-0.2
+0.4
phage
Bas30
-0.2
+0.1
+0.4
+0.3
+0.2
phage
Bas63
+0.3
+0.1
-0.1
+0.4
+0.3
phage
Bas26
+0.3
+0.2
+0.2
+0.2
+0.6
phage
Bas49
+1.4
+0.5
+0.8
+0.2
+0.6
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