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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_r00003 and ECD_t00003 are separated by 52 nucleotides
ECD_t00003 and ECD_00200 are separated by 162 nucleotides
ECD_00200 and ECD_00201 overlap by 4 nucleotides
ECD_00201 and ECD_00202 are separated by 240 nucleotides
ECD_r00003: ECD_r00003 - 5S ribosomal RNA, at 231,683 to 231,802
_r00003
ECD_t00003: ECD_t00003 - tRNA-Asp, at 231,855 to 231,931
_t00003
ECD_00200: ECD_00200 - 2,5-diketo-D-gluconate reductase B, at 232,094 to 232,897
_00200
ECD_00201: ECD_00201 - LysR family putative transcriptional regulator, at 232,894 to 233,808
_00201
ECD_00202: ECD_00202 - endo/exonuclease/phosphatase family protein, at 234,049 to 234,849
_00202
Group
Condition
ECD
_r00003
ECD
_t00003
ECD
_00200
ECD
_00201
ECD
_00202
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
-0.8
-0.5
-2.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
-0.9
-0.3
-2.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
-0.9
-0.5
-2.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
-0.8
-0.3
-1.6
phage
lambda1857_phage_12.5_MOI
N.D.
N.D.
-0.2
-0.3
-2.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
-0.9
-0.0
-1.4
phage
P2_phage_0.5625_MOI
N.D.
N.D.
-0.6
-1.4
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
-0.9
-0.0
-1.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
-0.6
-0.2
-1.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
-0.4
-0.1
-1.2
nophagecontrol
NoPhageControl
N.D.
N.D.
-0.7
-0.4
-0.4
phage
Ox4
N.D.
N.D.
-0.3
+0.2
-1.2
lb_plus_sm_buffer
NophageControl
N.D.
N.D.
-0.7
-0.2
-0.2
phage
Bas58
N.D.
N.D.
-0.6
-0.3
-0.2
no phage control
Control_TnN
N.D.
N.D.
-0.5
-0.2
-0.3
phage
Bas52
N.D.
N.D.
+0.0
-0.4
-0.5
phage
Bas52
N.D.
N.D.
-0.0
-0.2
-0.6
phage
CM1
N.D.
N.D.
-0.3
+0.0
-0.6
phage
Ox4
N.D.
N.D.
+0.2
+0.2
-0.9
no phage control
Control_TnJ
N.D.
N.D.
-0.6
+0.2
-0.0
phage
Bas24
N.D.
N.D.
+0.4
-0.2
-0.4
phage
CBA120
N.D.
N.D.
-0.5
+0.1
+0.3
lb_plus_sm_buffer
NophageControl
N.D.
N.D.
-0.3
+0.5
+0.2
phage
EV152
N.D.
N.D.
-0.2
+0.2
+0.5
phage
N4
N.D.
N.D.
+0.4
+0.2
+0.2
phage
Laval1261
N.D.
N.D.
+0.3
+0.1
+0.4
phage
Laval1261
N.D.
N.D.
+0.5
+0.3
+0.0
phage
Laval1257
N.D.
N.D.
+1.0
-0.1
+0.3
phage
EV116
N.D.
N.D.
+0.2
+0.0
+1.8
phage
EV116
N.D.
N.D.
+0.4
+0.4
+1.8
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