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Protein
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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00057 and ECD_00058 are separated by 52 nucleotides
ECD_00058 and ECD_00059 are separated by 254 nucleotides
ECD_00059 and ECD_00060 are separated by 116 nucleotides
ECD_00060 and ECD_00061 are separated by 11 nucleotides
ECD_00057: ECD_00057 - peptidyl-prolyl cis-trans isomerase (PPIase), at 57,612 to 58,898
_00057
ECD_00058: ECD_00058 - LPS assembly OM complex LptDE, beta-barrel component, at 58,951 to 61,305
_00058
ECD_00059: ECD_00059 - membrane-anchored DnaK co-chaperone, DNA-binding protein, at 61,560 to 62,375
_00059
ECD_00060: ECD_00060 - dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent, at 62,492 to 63,151
_00060
ECD_00061: ECD_00061 - RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase, at 63,163 to 66,069
_00061
Group
Condition
ECD
_00057
ECD
_00058
ECD
_00059
ECD
_00060
ECD
_00061
stress
Tailocin 256
N.D.
N.D.
+0.4
-1.5
-6.0
phage
EV116
N.D.
N.D.
+0.2
-0.5
-6.0
phage
EV116
N.D.
N.D.
-0.1
-0.3
-5.6
phage
Bas51
N.D.
N.D.
-0.3
-0.6
-2.8
phage
Bas52
N.D.
N.D.
-0.2
-0.5
-2.8
phage
CM1
N.D.
N.D.
-0.0
-1.0
-2.4
phage
Laval1259
N.D.
N.D.
-0.1
-0.6
-2.8
phage
Bas51
N.D.
N.D.
-0.1
-0.7
-2.6
phage
Bas52
N.D.
N.D.
-0.1
-0.4
-2.7
phage
Bas58
N.D.
N.D.
-0.1
-0.3
-2.7
phage
Bas48
N.D.
N.D.
-0.1
-0.2
-2.0
phage
Bas48
N.D.
N.D.
-0.3
-0.3
-1.6
phage
EV152
N.D.
N.D.
-0.1
-0.3
-1.2
stress
Tailocin 264
N.D.
N.D.
-0.0
-0.3
-1.2
phage
Ox4
N.D.
N.D.
-0.2
-0.6
-0.7
stress
Tailocin 264
N.D.
N.D.
-0.1
-0.3
-1.1
phage
EV152
N.D.
N.D.
-0.4
-0.1
-0.7
phage
Bas49
N.D.
N.D.
+0.4
+0.4
-1.3
phage
lambda1857_phage_12.5_MOI
N.D.
N.D.
-0.7
-0.3
+0.8
phage
Laval1257
N.D.
N.D.
-0.2
-0.2
+1.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
-0.1
+0.1
+1.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
+0.2
-0.0
+1.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
+0.1
+0.2
+1.0
phage
P2_phage_0.5625_MOI
N.D.
N.D.
-0.4
+0.6
+1.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
+0.3
+0.1
+1.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
+0.2
+0.2
+1.2
nophagecontrol
NoPhageControl
N.D.
N.D.
+0.1
+0.3
+1.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
+0.1
+0.3
+1.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
+0.3
+0.2
+1.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
+0.3
+0.2
+1.3
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