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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS22695 and DZA65_RS22700 are separated by 114 nucleotides
DZA65_RS22700 and DZA65_RS22705 are separated by 2 nucleotides
DZA65_RS22705 and DZA65_RS22710 overlap by 37 nucleotides
DZA65_RS22710 and DZA65_RS22715 are separated by 18 nucleotides
DZA65_RS22695: DZA65_RS22695 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 4,904,435 to 4,905,799
_RS22695
DZA65_RS22700: DZA65_RS22700 - membrane protein insertase YidC, at 4,905,914 to 4,907,545
_RS22700
DZA65_RS22705: DZA65_RS22705 - membrane protein insertion efficiency factor YidD, at 4,907,548 to 4,907,805
_RS22705
DZA65_RS22710: DZA65_RS22710 - ribonuclease P protein component, at 4,907,769 to 4,908,128
_RS22710
DZA65_RS22715: DZA65_RS22715 - 50S ribosomal protein L34, at 4,908,147 to 4,908,287
_RS22715
Group
Condition
DZA65
_RS22695
DZA65
_RS22700
DZA65
_RS22705
DZA65
_RS22710
DZA65
_RS22715
plant
Stem-Norland
-1.1
N.D.
-2.0
N.D.
N.D.
plant
Stem-Norland
-0.9
N.D.
-2.1
N.D.
N.D.
plant
Stem-Upstate
-0.5
N.D.
-2.5
N.D.
N.D.
plant
Stem-Norland
-1.4
N.D.
-1.5
N.D.
N.D.
plant
Stem-Atlantic
-0.8
N.D.
-2.0
N.D.
N.D.
plant
Stem-Atlantic
-0.7
N.D.
-2.0
N.D.
N.D.
plant
Stem-Norland
-1.0
N.D.
-1.8
N.D.
N.D.
plant
Stem-Norland
-0.9
N.D.
-1.6
N.D.
N.D.
plant
Stem-Atlantic
-1.2
N.D.
-1.1
N.D.
N.D.
plant
Stem-Upstate
-0.6
N.D.
-1.7
N.D.
N.D.
plant
Stem-Upstate
-0.8
N.D.
-1.4
N.D.
N.D.
plant
Stem-Atlantic
-1.0
N.D.
-1.2
N.D.
N.D.
plant
Stem-Norland
-0.9
N.D.
-1.2
N.D.
N.D.
plant
Stem-Atlantic
-0.8
N.D.
-1.3
N.D.
N.D.
plant
Stem-Atlantic
-0.8
N.D.
-1.1
N.D.
N.D.
control
PDB
-0.6
N.D.
-1.3
N.D.
N.D.
plant
Stem-Atlantic
-1.0
N.D.
-0.9
N.D.
N.D.
plant
Stem-Norland
-1.1
N.D.
-0.8
N.D.
N.D.
plant
Upstate
-0.6
N.D.
-1.2
N.D.
N.D.
plant
Stem-Norland
-0.9
N.D.
-0.9
N.D.
N.D.
plant
Stem-Upstate
-1.3
N.D.
-0.4
N.D.
N.D.
plant
Norland
-0.8
N.D.
-0.8
N.D.
N.D.
carbon source
M9+sucrose
-0.4
N.D.
-1.2
N.D.
N.D.
plant
Stem-Upstate
-0.8
N.D.
-0.8
N.D.
N.D.
control
PDB
-0.6
N.D.
-1.0
N.D.
N.D.
plant
Norland
-0.8
N.D.
-0.7
N.D.
N.D.
plant
Upstate
-1.0
N.D.
-0.5
N.D.
N.D.
plant
Atlantic
-0.6
N.D.
-0.8
N.D.
N.D.
plant
Atlantic
-1.2
N.D.
-0.2
N.D.
N.D.
plant
Upstate
-1.2
N.D.
-0.2
N.D.
N.D.
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