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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS22635 and DZA65_RS22640 overlap by 4 nucleotides
DZA65_RS22640 and DZA65_RS22645 are separated by 98 nucleotides
DZA65_RS22645 and DZA65_RS22650 are separated by 3 nucleotides
DZA65_RS22650 and DZA65_RS22655 are separated by 319 nucleotides
DZA65_RS22635: DZA65_RS22635 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 4,896,447 to 4,896,788
_RS22635
DZA65_RS22640: DZA65_RS22640 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 4,896,785 to 4,897,183
_RS22640
DZA65_RS22645: DZA65_RS22645 - GNAT family N-acetyltransferase, at 4,897,282 to 4,897,770
_RS22645
DZA65_RS22650: DZA65_RS22650 - 4-hydroxyphenylpyruvate dioxygenase, at 4,897,774 to 4,898,859
_RS22650
DZA65_RS22655: DZA65_RS22655 - MBL fold metallo-hydrolase, at 4,899,179 to 4,899,952
_RS22655
Group
Condition
DZA65
_RS22635
DZA65
_RS22640
DZA65
_RS22645
DZA65
_RS22650
DZA65
_RS22655
control
PDB
-3.9
-3.2
+0.1
-0.1
-0.1
control
PDB
-3.5
-2.6
-0.2
-0.1
-0.1
control
PDB
-3.1
-3.1
+0.1
+0.0
+0.1
control
PDB
-2.6
-3.3
-0.2
+0.0
+0.0
control
PDB
-2.2
-3.1
+0.0
-0.1
-0.1
control
PDB
-2.3
-2.4
+0.0
-0.1
-0.1
control
LB
-1.9
-2.1
-0.1
+0.2
-0.3
stress
1.88mM_PTB
-1.4
-2.2
+0.1
+0.1
+0.0
carbon source
M9+glycerol
-1.5
-1.1
-0.0
+0.1
+0.2
plant
Stem-Norland
-1.5
-0.5
-0.4
+0.0
+0.2
stress
1.88mM_PTB
-0.6
-1.4
-0.1
+0.1
-0.1
plant
Upstate
-1.7
-0.5
-0.1
+0.1
+0.1
plant
Stem-Upstate
-2.1
-0.7
-0.0
+0.2
+0.7
control
LB
-0.4
-1.3
-0.0
-0.0
-0.1
plant
Stem-Atlantic
-1.5
-0.5
+0.0
-0.1
+0.2
plant
Upstate
-0.7
-1.1
-0.2
+0.2
+0.0
plant
Atlantic
-1.2
-0.3
-0.0
-0.0
-0.1
stress
1.88mM_PTB
-0.6
-1.1
-0.0
-0.1
+0.1
control
LB
-0.8
-0.9
+0.0
+0.0
-0.1
plant
Atlantic
-0.8
-0.5
-0.1
-0.1
-0.1
plant
Upstate
-0.8
-0.5
-0.1
-0.0
-0.1
carbon source
M9+glycerol
-0.7
-0.6
+0.0
-0.1
-0.1
plant
Stem-Atlantic
-1.4
-0.1
+0.0
+0.2
+0.2
plant
Stem-Upstate
-0.8
-0.6
+0.1
+0.5
+0.1
plant
Stem-Norland
+0.6
-0.5
-0.1
-0.1
+0.2
plant
Norland
+1.4
-0.3
-0.2
-0.0
-0.0
plant
Stem-Norland
+0.7
+0.8
-0.1
+0.1
+0.0
carbon source
M9+glycerol
+0.8
+0.6
-0.1
+0.1
+0.2
plant
Norland
+1.0
+0.0
+0.2
+0.2
+0.3
carbon source
M9+glycerol
+1.9
+1.7
+0.0
-0.2
+0.3
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