Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS22515 and DZA65_RS22520 are separated by 54 nucleotidesDZA65_RS22520 and DZA65_RS22525 are separated by 311 nucleotidesDZA65_RS22525 and DZA65_RS22530 overlap by 8 nucleotidesDZA65_RS22530 and DZA65_RS22535 overlap by 4 nucleotides DZA65_RS22515: DZA65_RS22515 - beta-ketoacyl-ACP synthase, at 4,867,626 to 4,868,855 _RS22515 DZA65_RS22520: DZA65_RS22520 - diguanylate cyclase, at 4,868,910 to 4,871,225 _RS22520 DZA65_RS22525: DZA65_RS22525 - hypothetical protein, at 4,871,537 to 4,872,973 _RS22525 DZA65_RS22530: DZA65_RS22530 - P-loop NTPase, at 4,872,966 to 4,874,279 _RS22530 DZA65_RS22535: DZA65_RS22535 - hypothetical protein, at 4,874,276 to 4,874,563 _RS22535
Group Condition DZA65_RS22515 DZA65_RS22520 DZA65_RS22525 DZA65_RS22530 DZA65_RS22535
plant Stem-Upstate -0.2 -0.0 -0.0 -0.3 -0.2
plant Stem-Norland -0.0 -0.3 -0.1 -0.3 +0.1
carbon source M9+starch -0.1 -0.2 +0.0 -0.2 +0.1
carbon source M9+starch -0.2 -0.1 -0.1 -0.1 +0.0
control PDB -0.1 -0.0 -0.1 +0.1 -0.2
plant Atlantic -0.0 -0.1 +0.0 -0.1 -0.2
plant Stem-Upstate -0.2 -0.1 +0.2 -0.1 -0.1
plant Stem-Atlantic +0.2 -0.1 -0.2 -0.1 -0.1
control LB -0.1 -0.0 -0.2 +0.0 -0.0
plant Stem-Norland +0.0 -0.0 +0.1 +0.0 -0.4
control LB +0.1 +0.1 +0.0 -0.2 -0.2
control PDB -0.1 +0.0 -0.1 +0.1 -0.1
carbon source M9+polygalacturonate -0.2 -0.1 +0.0 -0.0 +0.1
plant Stem-Upstate -0.2 -0.1 +0.3 -0.0 +0.0
plant Upstate -0.1 +0.0 +0.0 +0.1 -0.1
carbon source M9+polygalacturonate -0.2 -0.1 -0.0 +0.0 +0.2
plant Stem-Norland +0.1 -0.1 +0.1 +0.1 -0.0
carbon source M9+polygalacturonate -0.1 -0.0 -0.1 +0.3 +0.0
plant Stem-Atlantic +0.0 +0.1 -0.1 +0.1 +0.0
plant Norland -0.1 +0.1 +0.1 +0.1 -0.0
plant Stem-Norland +0.1 +0.0 -0.2 +0.0 +0.2
plant Upstate +0.1 +0.1 -0.1 +0.0 -0.0
plant Stem-Norland +0.4 -0.2 +0.0 +0.1 -0.1
stress 1.88mM_PTB -0.0 -0.1 +0.1 +0.1 +0.1
plant Atlantic -0.1 +0.1 +0.2 +0.1 +0.0
plant Upstate +0.1 -0.0 +0.0 +0.1 +0.0
plant Stem-Upstate +0.0 +0.1 +0.3 -0.0 -0.0
plant Stem-Upstate -0.1 +0.1 +0.2 -0.3 +0.3
plant Atlantic +0.0 +0.1 +0.1 +0.2 -0.0
plant Stem-Norland +0.0 +0.1 +0.0 +0.0 +0.3
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DZA65_RS22515
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DZA65_RS22520
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