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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS22180 and DZA65_RS22185 are separated by 50 nucleotides
DZA65_RS22185 and DZA65_RS22190 are separated by 7 nucleotides
DZA65_RS22190 and DZA65_RS22195 are separated by 222 nucleotides
DZA65_RS22195 and DZA65_RS22200 are separated by 373 nucleotides
DZA65_RS22180: DZA65_RS22180 - fatty acid biosynthesis protein FabY, at 4,797,105 to 4,798,046
_RS22180
DZA65_RS22185: DZA65_RS22185 - D-tyrosyl-tRNA(Tyr) deacylase, at 4,798,097 to 4,798,534
_RS22185
DZA65_RS22190: DZA65_RS22190 - glucose-1-phosphatase, at 4,798,542 to 4,799,153
_RS22190
DZA65_RS22195: DZA65_RS22195 - ribosome-dependent GTPase TypA, at 4,799,376 to 4,801,199
_RS22195
DZA65_RS22200: DZA65_RS22200 - glutamate--ammonia ligase, at 4,801,573 to 4,802,982
_RS22200
Group
Condition
DZA65
_RS22180
DZA65
_RS22185
DZA65
_RS22190
DZA65
_RS22195
DZA65
_RS22200
plant
Stem-Norland
+0.2
-0.4
-0.3
-2.0
N.D.
plant
Stem-Norland
-0.1
-0.2
+0.0
-2.2
N.D.
plant
Stem-Norland
-0.2
-0.4
+0.1
-1.8
N.D.
plant
Upstate
-0.2
-0.1
-0.4
-1.6
N.D.
plant
Norland
-0.4
+0.0
-0.0
-1.7
N.D.
plant
Stem-Atlantic
-0.1
-0.4
+0.2
-1.8
N.D.
plant
Stem-Atlantic
-0.3
+0.1
+0.3
-2.1
N.D.
plant
Atlantic
-0.3
-0.1
-0.2
-1.3
N.D.
plant
Norland
-0.5
+0.0
-0.1
-1.4
N.D.
plant
Stem-Atlantic
-0.2
-0.0
+0.1
-1.8
N.D.
plant
Upstate
-0.4
-0.0
-0.1
-1.3
N.D.
plant
Stem-Atlantic
-0.1
+0.0
+0.3
-1.9
N.D.
plant
Norland
+0.0
-0.1
-0.2
-1.3
N.D.
plant
Atlantic
-0.4
-0.3
+0.0
-1.0
N.D.
plant
Upstate
+0.0
-0.1
-0.5
-1.1
N.D.
plant
Stem-Atlantic
-0.0
-0.1
+0.3
-1.8
N.D.
plant
Stem-Norland
+0.2
+0.1
-0.1
-1.7
N.D.
plant
Stem-Upstate
+0.1
-0.3
-0.1
-1.2
N.D.
plant
Stem-Norland
-0.5
+0.0
+0.1
-1.2
N.D.
plant
Stem-Atlantic
-0.0
+0.1
+0.2
-1.8
N.D.
plant
Stem-Atlantic
-0.1
+0.1
+0.1
-1.6
N.D.
plant
Stem-Norland
-0.1
-0.0
+0.2
-1.5
N.D.
plant
Stem-Upstate
-0.0
+0.2
+0.4
-1.8
N.D.
plant
Stem-Upstate
-0.5
+0.4
+0.6
-1.6
N.D.
plant
Stem-Upstate
-0.3
-0.3
+0.4
-0.8
N.D.
control
PDB
-0.2
+0.2
+0.2
-1.3
N.D.
plant
Stem-Norland
+0.3
+0.1
+0.3
-1.6
N.D.
plant
Stem-Norland
+0.1
+0.5
+0.1
-1.6
N.D.
plant
Stem-Upstate
-0.3
+0.2
+0.6
-1.3
N.D.
plant
Stem-Upstate
+0.7
-0.3
-0.2
-0.6
N.D.
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