Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS21725 and DZA65_RS21730 overlap by 4 nucleotidesDZA65_RS21730 and DZA65_RS21735 overlap by 4 nucleotidesDZA65_RS21735 and DZA65_RS21740 are separated by 78 nucleotidesDZA65_RS21740 and DZA65_RS21745 are separated by 402 nucleotides DZA65_RS21725: DZA65_RS21725 - high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF, at 4,698,887 to 4,700,365 _RS21725 DZA65_RS21730: DZA65_RS21730 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 4,700,362 to 4,701,636 _RS21730 DZA65_RS21735: DZA65_RS21735 - high-affinity branched-chain amino acid ABC transporter permease LivH, at 4,701,633 to 4,702,559 _RS21735 DZA65_RS21740: DZA65_RS21740 - branched-chain amino acid ABC transporter substrate-binding protein, at 4,702,638 to 4,703,750 _RS21740 DZA65_RS21745: DZA65_RS21745 - aspartate 1-decarboxylase autocleavage activator PanM, at 4,704,153 to 4,704,572 _RS21745
Group Condition DZA65_RS21725 DZA65_RS21730 DZA65_RS21735 DZA65_RS21740 DZA65_RS21745
carbon source M9+polygalacturonate -0.2 +0.0 +0.1 -0.0 -2.9
carbon source M9+starch -0.1 -0.1 -0.0 -0.1 -2.2
carbon source M9+polygalacturonate -0.2 -0.0 +0.1 +0.1 -2.2
carbon source M9+sucrose +0.0 -0.1 -0.0 -0.1 -1.9
carbon source M9+polygalacturonate -0.1 +0.0 -0.0 -0.1 -2.0
carbon source M9+glycerol -0.2 -0.1 -0.1 -0.1 -1.4
carbon source M9+glycerol -0.1 -0.0 -0.2 -0.0 -1.7
carbon source M9+sucrose +0.0 -0.1 -0.1 -0.2 -1.6
carbon source M9+starch +0.0 +0.0 +0.0 -0.1 -1.8
carbon source M9+glycerol -0.3 -0.2 +0.0 -0.0 -1.4
carbon source M9+glycerol -0.2 -0.1 +0.1 -0.2 -1.3
carbon source M9+sucrose -0.1 -0.1 -0.0 -0.0 -1.4
carbon source M9+starch -0.0 -0.0 -0.1 +0.0 -1.4
carbon source M9+glycerol -0.1 -0.0 -0.2 +0.0 -1.0
carbon source M9+glycerol -0.1 -0.2 -0.0 -0.1 -0.9
plant Stem-Upstate -0.1 -0.3 +0.0 -0.1 -0.6
control PDB -0.1 -0.0 -0.0 -0.1 -0.7
plant Stem-Upstate -0.3 +0.1 -0.0 -0.1 -0.5
plant Stem-Upstate -0.3 -0.1 -0.1 -0.0 -0.3
plant Stem-Atlantic -0.0 +0.1 -0.1 +0.1 -0.6
plant Stem-Upstate -0.3 -0.6 +0.3 +0.2 -0.1
plant Upstate +0.1 -0.1 +0.1 -0.1 -0.4
plant Stem-Norland -0.2 +0.1 -0.1 +0.3 -0.3
plant Norland -0.1 +0.2 +0.1 -0.1 -0.2
plant Stem-Atlantic -0.0 +0.1 -0.1 +0.3 -0.3
plant Atlantic -0.1 -0.0 +0.1 -0.1 +0.4
plant Stem-Norland +0.2 -0.0 +0.3 -0.1 -0.1
control PDB +0.1 +0.1 +0.2 -0.1 +0.3
plant Stem-Norland +0.2 +0.4 -0.1 -0.0 +0.3
plant Stem-Norland +0.3 +0.1 +0.4 +0.0 +0.3
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