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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS21115 and DZA65_RS21120 are separated by 325 nucleotides
DZA65_RS21120 and DZA65_RS21125 overlap by 4 nucleotides
DZA65_RS21125 and DZA65_RS21130 are separated by 74 nucleotides
DZA65_RS21130 and DZA65_RS21135 are separated by 2 nucleotides
DZA65_RS21115: DZA65_RS21115 - class I adenylate cyclase, at 4,563,122 to 4,565,680
_RS21115
DZA65_RS21120: DZA65_RS21120 - hydroxymethylbilane synthase, at 4,566,006 to 4,566,947
_RS21120
DZA65_RS21125: DZA65_RS21125 - uroporphyrinogen-III synthase, at 4,566,944 to 4,567,684
_RS21125
DZA65_RS21130: DZA65_RS21130 - uroporphyrinogen-III C-methyltransferase, at 4,567,759 to 4,568,886
_RS21130
DZA65_RS21135: DZA65_RS21135 - protoheme IX biogenesis protein HemY, at 4,568,889 to 4,570,085
_RS21135
Group
Condition
DZA65
_RS21115
DZA65
_RS21120
DZA65
_RS21125
DZA65
_RS21130
DZA65
_RS21135
plant
Stem-Atlantic
-1.7
N.D.
N.D.
-0.4
-0.3
plant
Stem-Atlantic
-2.2
N.D.
N.D.
-0.0
-0.1
plant
Stem-Upstate
-1.6
N.D.
N.D.
-0.4
-0.2
plant
Stem-Atlantic
-2.1
N.D.
N.D.
-0.2
+0.1
plant
Stem-Atlantic
-1.4
N.D.
N.D.
-0.4
-0.3
plant
Stem-Norland
-2.1
N.D.
N.D.
-0.2
+0.3
plant
Stem-Atlantic
-1.7
N.D.
N.D.
-0.0
-0.2
plant
Stem-Atlantic
-1.4
N.D.
N.D.
-0.3
-0.2
plant
Stem-Norland
-1.4
N.D.
N.D.
-0.3
-0.1
plant
Stem-Upstate
-1.8
N.D.
N.D.
-0.1
+0.1
plant
Stem-Norland
-1.7
N.D.
N.D.
-0.0
+0.1
plant
Stem-Norland
-1.1
N.D.
N.D.
-0.4
-0.1
plant
Upstate
-0.9
N.D.
N.D.
-0.5
-0.1
plant
Stem-Norland
-1.1
N.D.
N.D.
-0.1
-0.2
plant
Stem-Upstate
-0.7
N.D.
N.D.
-0.4
-0.4
plant
Stem-Norland
-1.3
N.D.
N.D.
-0.1
-0.1
control
LB
-1.0
N.D.
N.D.
-0.4
-0.1
plant
Stem-Upstate
-1.0
N.D.
N.D.
-0.2
-0.2
control
LB
-0.9
N.D.
N.D.
-0.5
+0.1
plant
Stem-Norland
-1.3
N.D.
N.D.
-0.3
+0.3
plant
Upstate
-1.0
N.D.
N.D.
-0.4
+0.1
plant
Stem-Upstate
-1.2
N.D.
N.D.
-0.1
+0.2
stress
1.88mM_PTB
-0.8
N.D.
N.D.
-0.5
+0.3
plant
Norland
-1.0
N.D.
N.D.
-0.2
+0.2
plant
Stem-Upstate
-1.2
N.D.
N.D.
+0.1
+0.1
plant
Upstate
-0.7
N.D.
N.D.
-0.4
+0.3
stress
1.88mM_PTB
-0.7
N.D.
N.D.
-0.3
+0.3
control
PDB
+0.9
N.D.
N.D.
-0.4
-0.3
control
PDB
+0.9
N.D.
N.D.
+0.4
+0.4
control
PDB
+0.9
N.D.
N.D.
+0.5
+0.4
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