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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS21095 and DZA65_RS21100 overlap by 4 nucleotides
DZA65_RS21100 and DZA65_RS21105 are separated by 88 nucleotides
DZA65_RS21105 and DZA65_RS21110 are separated by 59 nucleotides
DZA65_RS21110 and DZA65_RS21115 are separated by 94 nucleotides
DZA65_RS21095: DZA65_RS21095 - DUF484 domain-containing protein, at 4,560,854 to 4,561,555
_RS21095
DZA65_RS21100: DZA65_RS21100 - diaminopimelate epimerase, at 4,561,552 to 4,562,376
_RS21100
DZA65_RS21105: DZA65_RS21105 - hypothetical protein, at 4,562,465 to 4,562,647
_RS21105
DZA65_RS21110: DZA65_RS21110 - iron donor protein CyaY, at 4,562,707 to 4,563,027
_RS21110
DZA65_RS21115: DZA65_RS21115 - class I adenylate cyclase, at 4,563,122 to 4,565,680
_RS21115
Group
Condition
DZA65
_RS21095
DZA65
_RS21100
DZA65
_RS21105
DZA65
_RS21110
DZA65
_RS21115
plant
Stem-Upstate
-1.1
N.D.
N.D.
-2.4
-1.6
plant
Stem-Atlantic
-0.9
N.D.
N.D.
-1.9
-1.4
plant
Stem-Atlantic
-0.6
N.D.
N.D.
-1.2
-2.2
plant
Stem-Norland
-0.9
N.D.
N.D.
-0.9
-2.1
plant
Stem-Upstate
-1.4
N.D.
N.D.
-1.5
-0.7
plant
Stem-Upstate
-1.4
N.D.
N.D.
-0.2
-1.8
plant
Stem-Atlantic
-1.2
N.D.
N.D.
-1.0
-1.1
plant
Stem-Norland
-0.7
N.D.
N.D.
-0.8
-1.4
plant
Stem-Norland
-1.2
N.D.
N.D.
-0.1
-1.7
plant
Stem-Atlantic
-0.8
N.D.
N.D.
-0.4
-1.7
plant
Stem-Norland
-0.7
N.D.
N.D.
-0.8
-1.3
plant
Stem-Atlantic
-0.4
N.D.
N.D.
-0.3
-2.1
plant
Stem-Atlantic
-1.1
N.D.
N.D.
-0.3
-1.4
plant
Stem-Norland
-1.3
N.D.
N.D.
+0.0
-1.3
plant
Stem-Norland
-1.4
N.D.
N.D.
-0.1
-1.1
plant
Stem-Upstate
-1.3
N.D.
N.D.
-0.0
-1.2
plant
Stem-Norland
-0.6
N.D.
N.D.
-0.6
-1.1
plant
Stem-Norland
-0.4
N.D.
N.D.
-0.8
-1.0
plant
Stem-Upstate
-1.5
N.D.
N.D.
-0.1
-0.7
plant
Stem-Atlantic
-0.5
N.D.
N.D.
+0.0
-1.7
plant
Norland
-0.4
N.D.
N.D.
-0.8
-1.0
control
LB
-0.4
N.D.
N.D.
-0.9
-0.9
plant
Norland
-0.4
N.D.
N.D.
-0.5
-0.9
plant
Stem-Upstate
-0.5
N.D.
N.D.
-0.1
-1.2
plant
Atlantic
-0.7
N.D.
N.D.
-0.1
-1.0
control
LB
-0.3
N.D.
N.D.
-0.6
-0.8
plant
Stem-Upstate
-0.3
N.D.
N.D.
-0.3
-1.0
control
LB
-0.2
N.D.
N.D.
-0.4
-1.0
plant
Norland
-0.2
N.D.
N.D.
-0.5
-0.9
plant
Upstate
+0.3
N.D.
N.D.
-0.4
-1.0
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