Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS20775 and DZA65_RS20780 overlap by 1 nucleotidesDZA65_RS20780 and DZA65_RS20785 overlap by 1 nucleotidesDZA65_RS20785 and DZA65_RS20790 overlap by 7 nucleotidesDZA65_RS20790 and DZA65_RS20795 are separated by 102 nucleotides DZA65_RS20775: DZA65_RS20775 - DUF2531 family protein, at 4,482,728 to 4,483,084 _RS20775 DZA65_RS20780: DZA65_RS20780 - hypothetical protein, at 4,483,084 to 4,483,632 _RS20780 DZA65_RS20785: DZA65_RS20785 - PilN domain-containing protein, at 4,483,632 to 4,484,192 _RS20785 DZA65_RS20790: DZA65_RS20790 - pilus assembly protein PilM, at 4,484,186 to 4,485,079 _RS20790 DZA65_RS20795: DZA65_RS20795 - peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA, at 4,485,182 to 4,487,740 _RS20795
Group Condition DZA65_RS20775 DZA65_RS20780 DZA65_RS20785 DZA65_RS20790 DZA65_RS20795
control LB -3.4 +0.0 -0.3 -0.1 -0.4
plant Stem-Atlantic -3.2 +0.1 +0.1 -0.2 -0.5
plant Stem-Atlantic -2.0 -0.2 -0.2 +0.0 -0.2
control PDB -1.4 +0.2 +0.1 -0.0 -0.6
control PDB -1.1 +0.1 -0.1 +0.0 -0.5
control PDB -0.5 +0.0 -0.3 -0.1 -0.7
plant Stem-Norland -0.3 -0.6 +0.2 -0.1 -0.7
plant Stem-Norland -1.2 +0.3 +0.1 -0.1 -0.6
plant Stem-Upstate +0.0 -0.5 +0.1 +0.1 -1.1
plant Atlantic -1.0 -0.1 -0.0 +0.0 -0.3
plant Stem-Norland -0.5 +0.0 -0.0 -0.0 -0.8
plant Stem-Norland -1.0 -0.2 -0.0 +0.1 -0.2
plant Stem-Norland -0.2 -0.1 -0.2 -0.1 -0.7
plant Stem-Atlantic -1.1 +0.0 +0.1 -0.2 +0.2
control PDB -0.9 +0.1 +0.2 +0.0 -0.4
plant Upstate -1.0 +0.1 +0.1 -0.0 -0.2
plant Stem-Norland +0.3 -0.5 -0.1 -0.2 -0.6
plant Atlantic -1.0 +0.2 -0.0 +0.1 -0.3
control LB -0.9 +0.1 -0.2 -0.1 +0.2
plant Stem-Upstate +0.4 +0.2 -0.0 -0.0 -0.8
carbon source M9+sucrose +0.6 -0.1 -0.0 -0.0 -0.6
carbon source M9+polygalacturonate +0.8 -0.0 -0.2 -0.0 -0.5
carbon source M9+sucrose +0.7 +0.1 +0.3 -0.1 -0.6
carbon source M9+sucrose +1.0 -0.2 -0.1 +0.2 -0.4
plant Stem-Norland +1.3 +0.1 +0.1 -0.1 -0.5
plant Stem-Upstate +0.9 -0.0 +0.4 -0.1 -0.3
carbon source M9+glycerol +0.0 -0.1 -0.2 +0.0 +1.1
carbon source M9+starch +1.7 +0.0 -0.1 -0.0 -0.2
carbon source M9+starch +1.3 +0.4 -0.2 +0.1 +0.0
plant Stem-Upstate -0.2 +1.0 +1.1 +0.3 -0.1
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