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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS20695 and DZA65_RS20700 are separated by 1 nucleotides
DZA65_RS20700 and DZA65_RS20705 are separated by 458 nucleotides
DZA65_RS20705 and DZA65_RS20710 are separated by 552 nucleotides
DZA65_RS20710 and DZA65_RS20715 are separated by 168 nucleotides
DZA65_RS20695: DZA65_RS20695 - gamma-aminobutyric-acid receptor subunit beta, at 4,464,964 to 4,465,995
_RS20695
DZA65_RS20700: DZA65_RS20700 - glutamate decarboxylase, at 4,465,997 to 4,467,367
_RS20700
DZA65_RS20705: DZA65_RS20705 - polysaccharide lyase, at 4,467,826 to 4,468,953
_RS20705
DZA65_RS20710: DZA65_RS20710 - polysaccharide lyase, at 4,469,506 to 4,470,633
_RS20710
DZA65_RS20715: DZA65_RS20715 - right-handed parallel beta-helix repeat-containing protein, at 4,470,802 to 4,472,064
_RS20715
Group
Condition
DZA65
_RS20695
DZA65
_RS20700
DZA65
_RS20705
DZA65
_RS20710
DZA65
_RS20715
plant
Atlantic
+0.1
-0.3
-0.0
-0.1
-0.1
plant
Stem-Norland
-0.2
-0.1
+0.1
+0.0
-0.1
carbon source
M9+glycerol
-0.0
-0.1
-0.2
+0.1
-0.1
carbon source
M9+polygalacturonate
-0.0
-0.1
+0.1
-0.0
-0.2
plant
Norland
+0.1
-0.3
+0.0
+0.1
-0.1
plant
Stem-Upstate
+0.1
-0.2
+0.2
+0.0
-0.3
plant
Stem-Upstate
-0.1
-0.1
+0.0
+0.1
-0.1
plant
Norland
+0.2
-0.2
+0.0
+0.0
-0.1
plant
Atlantic
+0.1
+0.1
-0.0
+0.0
-0.3
plant
Stem-Atlantic
-0.1
+0.2
+0.2
-0.1
-0.2
plant
Stem-Norland
-0.1
+0.1
+0.2
+0.0
-0.1
plant
Upstate
+0.1
-0.1
+0.1
+0.1
-0.1
stress
3.75mM_PTB
-0.1
-0.1
+0.1
+0.2
-0.1
plant
Atlantic
+0.0
-0.2
+0.2
+0.1
+0.0
stress
1.88mM_PTB
-0.1
-0.1
+0.2
+0.1
+0.1
plant
Stem-Norland
+0.2
-0.1
+0.3
-0.1
-0.3
stress
1.88mM_PTB
-0.0
-0.2
+0.1
+0.1
+0.2
plant
Stem-Atlantic
-0.1
-0.1
+0.2
-0.0
+0.2
plant
Stem-Upstate
-0.0
-0.3
+0.2
+0.2
+0.1
plant
Stem-Norland
+0.1
-0.1
+0.1
+0.1
+0.2
plant
Stem-Upstate
-0.1
+0.1
+0.3
+0.2
-0.1
plant
Stem-Upstate
-0.2
+0.3
+0.2
+0.2
+0.0
plant
Stem-Upstate
-0.3
+0.2
+0.2
+0.2
+0.1
plant
Norland
+0.2
+0.1
+0.1
+0.1
+0.1
plant
Stem-Norland
+0.0
-0.1
+0.1
+0.0
+0.4
carbon source
M9+glycerol
+0.2
+0.1
+0.1
+0.1
+0.0
plant
Stem-Atlantic
+0.1
+0.4
+0.1
+0.0
+0.0
plant
Stem-Atlantic
+0.1
+0.1
+0.3
-0.0
+0.1
plant
Stem-Atlantic
+0.1
+0.0
+0.2
-0.0
+0.3
plant
Stem-Norland
+0.0
+0.4
+0.1
+0.0
+0.2
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DZA65_RS20705
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