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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS20545 and DZA65_RS20550 are separated by 11 nucleotides
DZA65_RS20550 and DZA65_RS20555 are separated by 17 nucleotides
DZA65_RS20555 and DZA65_RS20560 overlap by 1 nucleotides
DZA65_RS20560 and DZA65_RS20565 are separated by 183 nucleotides
DZA65_RS20545: DZA65_RS20545 - sulfurtransferase complex subunit TusB, at 4,434,431 to 4,434,718
_RS20545
DZA65_RS20550: DZA65_RS20550 - sulfurtransferase complex subunit TusC, at 4,434,730 to 4,435,089
_RS20550
DZA65_RS20555: DZA65_RS20555 - sulfurtransferase complex subunit TusD, at 4,435,107 to 4,435,496
_RS20555
DZA65_RS20560: DZA65_RS20560 - transcriptional regulator, at 4,435,496 to 4,436,218
_RS20560
DZA65_RS20565: DZA65_RS20565 - phosphoethanolamine transferase EptA, at 4,436,402 to 4,438,045
_RS20565
Group
Condition
DZA65
_RS20545
DZA65
_RS20550
DZA65
_RS20555
DZA65
_RS20560
DZA65
_RS20565
plant
Stem-Atlantic
-0.7
-2.5
-3.7
-0.6
+0.0
plant
Stem-Upstate
-2.8
-1.7
-2.2
-0.4
+0.1
plant
Stem-Norland
-2.0
-2.4
-0.9
-1.4
-0.1
plant
Stem-Norland
-1.4
-2.9
-2.2
-0.3
+0.1
plant
Stem-Atlantic
-1.7
-2.3
-2.6
-0.3
+0.1
plant
Stem-Upstate
-1.9
-2.0
-3.1
+0.1
+0.1
plant
Upstate
-1.9
-1.4
-2.3
-0.9
+0.1
plant
Stem-Upstate
-1.2
-2.6
-2.0
-0.6
+0.1
plant
Stem-Norland
-1.5
-2.7
-1.9
-0.2
-0.0
plant
Stem-Upstate
-1.5
-1.0
-3.7
-0.2
+0.2
plant
Stem-Atlantic
-1.4
-1.7
-3.3
+0.1
+0.1
plant
Stem-Norland
-1.9
-1.6
-2.1
-0.6
+0.1
plant
Stem-Norland
-1.4
-1.5
-2.4
-0.6
+0.1
plant
Stem-Atlantic
-0.9
-2.1
-2.8
-0.2
+0.1
plant
Upstate
-1.9
-1.5
-1.8
-0.7
+0.0
plant
Stem-Norland
-0.3
-1.9
-3.0
-0.7
+0.1
plant
Stem-Norland
-1.4
-2.8
-1.3
-0.2
+0.1
plant
Stem-Atlantic
-0.9
-1.1
-2.7
-1.0
+0.2
plant
Upstate
-1.7
-2.2
-1.3
-0.1
+0.1
plant
Stem-Atlantic
-0.5
-2.3
-2.4
-0.3
+0.2
plant
Stem-Upstate
-1.3
-1.8
-1.1
-1.2
+0.1
carbon source
M9+polygalacturonate
-1.0
-2.4
-0.8
-0.9
-0.0
plant
Norland
-1.4
-2.2
-1.1
-0.5
+0.1
plant
Norland
-1.1
-2.1
-1.5
-0.3
-0.0
control
LB
-1.0
-1.8
-1.7
-0.6
+0.1
plant
Stem-Norland
-1.2
-1.3
-1.8
-0.5
-0.0
plant
Norland
-0.7
-1.9
-1.4
-0.8
+0.1
control
PDB
-1.4
-1.8
-1.3
-0.5
+0.2
plant
Stem-Upstate
-1.5
-1.2
-1.3
-0.8
+0.1
control
PDB
-1.3
-1.5
-1.7
+0.3
-0.1
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