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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS20150 and DZA65_RS20155 are separated by 149 nucleotides
DZA65_RS20155 and DZA65_RS20160 are separated by 86 nucleotides
DZA65_RS20160 and DZA65_RS20165 are separated by 29 nucleotides
DZA65_RS20165 and DZA65_RS20175 are separated by 339 nucleotides
DZA65_RS20150: DZA65_RS20150 - oligoribonuclease, at 4,364,999 to 4,365,541
_RS20150
DZA65_RS20155: DZA65_RS20155 - small ribosomal subunit biogenesis GTPase RsgA, at 4,365,691 to 4,366,740
_RS20155
DZA65_RS20160: DZA65_RS20160 - phosphatidylserine decarboxylase, at 4,366,827 to 4,367,741
_RS20160
DZA65_RS20165: DZA65_RS20165 - miniconductance mechanosensitive channel MscM, at 4,367,771 to 4,371,094
_RS20165
DZA65_RS20175: DZA65_RS20175 - elongation factor P--(R)-beta-lysine ligase, at 4,371,434 to 4,372,411
_RS20175
Group
Condition
DZA65
_RS20150
DZA65
_RS20155
DZA65
_RS20160
DZA65
_RS20165
DZA65
_RS20175
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-2.8
N.D.
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-2.7
N.D.
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-2.5
N.D.
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-2.4
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.5
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.5
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.4
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.3
N.D.
plant
Upstate
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
-0.3
N.D.
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
M9+starch
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.2
N.D.
stress
1.88mM_PTB
N.D.
N.D.
N.D.
-0.2
N.D.
plant
Atlantic
N.D.
N.D.
N.D.
-0.2
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.2
N.D.
control
LB
N.D.
N.D.
N.D.
-0.2
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
M9+starch
N.D.
N.D.
N.D.
-0.2
N.D.
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.2
N.D.
plant
Norland
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
+0.1
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
+0.2
N.D.
control
LB
N.D.
N.D.
N.D.
+0.2
N.D.
plant
Stem-Norland
N.D.
N.D.
N.D.
+0.2
N.D.
carbon source
M9+glycerol
N.D.
N.D.
N.D.
+0.2
N.D.
plant
Atlantic
N.D.
N.D.
N.D.
+0.2
N.D.
plant
Norland
N.D.
N.D.
N.D.
+0.3
N.D.
plant
Norland
N.D.
N.D.
N.D.
+0.4
N.D.
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