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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS20140 and DZA65_RS20145 are separated by 319 nucleotides
DZA65_RS20145 and DZA65_RS20150 are separated by 180 nucleotides
DZA65_RS20150 and DZA65_RS20155 are separated by 149 nucleotides
DZA65_RS20155 and DZA65_RS20160 are separated by 86 nucleotides
DZA65_RS20140: DZA65_RS20140 - hypothetical protein, at 4,364,148 to 4,364,423
_RS20140
DZA65_RS20145: DZA65_RS20145 - tRNA-Gly, at 4,364,743 to 4,364,818
_RS20145
DZA65_RS20150: DZA65_RS20150 - oligoribonuclease, at 4,364,999 to 4,365,541
_RS20150
DZA65_RS20155: DZA65_RS20155 - small ribosomal subunit biogenesis GTPase RsgA, at 4,365,691 to 4,366,740
_RS20155
DZA65_RS20160: DZA65_RS20160 - phosphatidylserine decarboxylase, at 4,366,827 to 4,367,741
_RS20160
Group
Condition
DZA65
_RS20140
DZA65
_RS20145
DZA65
_RS20150
DZA65
_RS20155
DZA65
_RS20160
plant
Stem-Upstate
-0.6
N.D.
N.D.
N.D.
N.D.
plant
Norland
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-0.4
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.3
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.3
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.3
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-0.2
N.D.
N.D.
N.D.
N.D.
stress
3.75mM_PTB
-0.2
N.D.
N.D.
N.D.
N.D.
control
LB
-0.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-0.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
+0.2
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
+0.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
+0.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
+0.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
+0.2
N.D.
N.D.
N.D.
N.D.
plant
Norland
+0.2
N.D.
N.D.
N.D.
N.D.
control
PDB
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.3
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
+0.3
N.D.
N.D.
N.D.
N.D.
control
PDB
+0.3
N.D.
N.D.
N.D.
N.D.
control
PDB
+0.3
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
+0.3
N.D.
N.D.
N.D.
N.D.
control
LB
+0.3
N.D.
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.4
N.D.
N.D.
N.D.
N.D.
plant
Upstate
+0.5
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
+0.8
N.D.
N.D.
N.D.
N.D.
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