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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS20055 and DZA65_RS20060 are separated by 270 nucleotides
DZA65_RS20060 and DZA65_RS20065 are separated by 11 nucleotides
DZA65_RS20065 and DZA65_RS20070 overlap by 4 nucleotides
DZA65_RS20070 and DZA65_RS20075 are separated by 365 nucleotides
DZA65_RS20055: DZA65_RS20055 - tail fiber protein, at 4,346,329 to 4,347,243
_RS20055
DZA65_RS20060: DZA65_RS20060 - HlyD family efflux transporter periplasmic adaptor subunit, at 4,347,514 to 4,349,622
_RS20060
DZA65_RS20065: DZA65_RS20065 - HlyD family efflux transporter periplasmic adaptor subunit, at 4,349,634 to 4,350,953
_RS20065
DZA65_RS20070: DZA65_RS20070 - efflux RND transporter periplasmic adaptor subunit, at 4,350,950 to 4,351,753
_RS20070
DZA65_RS20075: DZA65_RS20075 - hypothetical protein, at 4,352,119 to 4,352,325
_RS20075
Group
Condition
DZA65
_RS20055
DZA65
_RS20060
DZA65
_RS20065
DZA65
_RS20070
DZA65
_RS20075
plant
Stem-Atlantic
-0.0
+0.0
-0.3
-0.1
-0.6
plant
Stem-Norland
-0.1
-0.0
+0.4
-0.1
-1.1
stress
3.75mM_PTB
+0.0
-0.0
-0.5
-0.1
-0.2
plant
Stem-Norland
+0.1
-0.1
-0.0
-0.2
-0.5
plant
Stem-Upstate
+0.0
-0.2
+0.3
-0.2
-0.4
control
LB
+0.1
-0.0
-0.1
-0.5
-0.1
stress
3.75mM_PTB
+0.0
+0.0
-0.4
+0.2
-0.3
plant
Stem-Norland
-0.1
+0.1
+0.1
-0.2
-0.3
control
LB
+0.0
+0.0
-0.4
-0.2
+0.3
plant
Stem-Upstate
+0.0
-0.1
-0.7
+0.4
+0.2
plant
Stem-Upstate
-0.2
+0.1
+0.6
-0.2
-0.3
plant
Stem-Atlantic
-0.1
+0.1
-0.2
-0.1
+0.4
plant
Stem-Upstate
-0.0
-0.1
+0.4
+0.1
-0.3
plant
Stem-Atlantic
+0.0
-0.0
-0.0
-0.4
+0.4
plant
Atlantic
+0.1
+0.0
-0.4
-0.0
+0.4
carbon source
M9+sucrose
-0.0
+0.0
-0.2
-0.2
+0.5
carbon source
M9+glycerol
-0.0
+0.0
+0.1
-0.4
+0.4
plant
Atlantic
+0.1
+0.0
+0.1
-0.3
+0.3
plant
Stem-Norland
-0.1
+0.2
+0.6
-0.4
-0.0
stress
1.88mM_PTB
+0.1
-0.0
-0.3
+0.3
+0.3
plant
Stem-Norland
-0.0
+0.1
+0.7
-0.4
+0.1
plant
Atlantic
+0.3
-0.0
+0.4
-0.1
-0.0
plant
Norland
+0.2
+0.0
-0.0
-0.1
+0.5
plant
Upstate
+0.1
+0.2
-0.0
-0.1
+0.4
stress
1.88mM_PTB
-0.0
+0.0
-0.1
+0.0
+0.7
carbon source
M9+polygalacturonate
+0.0
-0.1
+0.3
-0.0
+0.6
carbon source
M9+starch
+0.1
+0.0
+0.2
-0.1
+0.5
plant
Stem-Norland
-0.0
+0.2
+0.2
-0.3
+0.8
plant
Atlantic
+0.1
+0.0
+0.2
+0.1
+0.6
plant
Stem-Norland
-0.0
+0.1
+0.5
+0.1
+0.8
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