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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS19980 and DZA65_RS19985 are separated by 10 nucleotides
DZA65_RS19985 and DZA65_RS19990 are separated by 345 nucleotides
DZA65_RS19990 and DZA65_RS19995 are separated by 233 nucleotides
DZA65_RS19995 and DZA65_RS20000 are separated by 11 nucleotides
DZA65_RS19980: DZA65_RS19980 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifN, at 4,322,097 to 4,323,482
_RS19980
DZA65_RS19985: DZA65_RS19985 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE, at 4,323,493 to 4,324,866
_RS19985
DZA65_RS19990: DZA65_RS19990 - chemotaxis protein, at 4,325,212 to 4,326,804
_RS19990
DZA65_RS19995: DZA65_RS19995 - hypothetical protein, at 4,327,038 to 4,327,436
_RS19995
DZA65_RS20000: DZA65_RS20000 - HipA domain-containing protein, at 4,327,448 to 4,327,918
_RS20000
Group
Condition
DZA65
_RS19980
DZA65
_RS19985
DZA65
_RS19990
DZA65
_RS19995
DZA65
_RS20000
plant
Stem-Upstate
-0.1
-0.2
-0.6
-0.1
-0.2
plant
Stem-Upstate
+0.0
-0.0
-0.4
-0.9
+0.4
plant
Stem-Upstate
-0.0
-0.3
-0.2
-0.5
+0.1
plant
Stem-Atlantic
+0.1
-0.1
-0.4
-0.4
-0.1
plant
Stem-Upstate
-0.1
-0.1
-0.4
-0.7
+0.3
plant
Stem-Atlantic
-0.0
-0.1
-0.3
-0.4
+0.1
plant
Stem-Norland
-0.2
-0.1
-0.4
-0.1
+0.1
carbon source
M9+polygalacturonate
-0.1
-0.1
-0.2
-0.2
-0.1
plant
Stem-Norland
+0.1
-0.1
-0.2
-0.2
-0.1
plant
Stem-Upstate
-0.6
+0.3
-0.3
-0.2
+0.1
plant
Stem-Atlantic
-0.0
+0.1
-0.5
-0.1
-0.1
carbon source
M9+glycerol
-0.0
+0.0
-0.1
-0.5
+0.0
plant
Stem-Atlantic
-0.1
-0.1
-0.3
-0.2
+0.2
plant
Stem-Norland
-0.0
+0.2
-0.7
-0.1
+0.1
plant
Stem-Atlantic
+0.1
+0.2
-0.8
-0.1
+0.1
plant
Stem-Norland
-0.1
-0.1
-0.0
-0.4
+0.3
plant
Stem-Upstate
-0.0
+0.1
-0.5
+0.1
+0.1
control
PDB
-0.1
+0.1
+0.1
-0.2
-0.1
plant
Stem-Norland
-0.0
+0.3
-0.4
-0.2
+0.1
plant
Stem-Upstate
+0.3
+0.1
-0.7
+0.6
-0.4
control
LB
-0.1
-0.1
+0.2
+0.1
-0.1
carbon source
M9+glycerol
-0.1
-0.1
+0.3
+0.2
+0.1
plant
Norland
-0.0
+0.2
+0.2
-0.1
+0.2
plant
Upstate
+0.0
+0.1
+0.2
-0.1
+0.2
plant
Upstate
-0.2
+0.0
+0.1
+0.3
+0.3
plant
Stem-Norland
+0.1
+0.2
-0.3
+0.3
+0.2
plant
Norland
+0.0
+0.1
-0.1
+0.3
+0.2
plant
Atlantic
-0.2
+0.2
-0.0
+0.4
+0.2
plant
Norland
+0.2
+0.2
+0.0
+0.3
+0.1
plant
Upstate
-0.0
+0.3
+0.3
+0.2
+0.2
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