Fitness for 5 genes in Dickeya dianthicola ME23

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 77 experiments or choose conditions or try the comparative fitness browser

500 ntDZA65_RS19680 and DZA65_RS19685 are separated by 144 nucleotidesDZA65_RS19685 and DZA65_RS19690 overlap by 8 nucleotidesDZA65_RS19690 and DZA65_RS19695 are separated by 27 nucleotidesDZA65_RS19695 and DZA65_RS19700 overlap by 4 nucleotides DZA65_RS19680: DZA65_RS19680 - RNA chaperone Hfq, at 4,261,218 to 4,261,517 _RS19680 DZA65_RS19685: DZA65_RS19685 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 4,261,662 to 4,262,603 _RS19685 DZA65_RS19690: DZA65_RS19690 - DNA mismatch repair endonuclease MutL, at 4,262,596 to 4,264,524 _RS19690 DZA65_RS19695: DZA65_RS19695 - N-acetylmuramoyl-L-alanine amidase AmiB, at 4,264,552 to 4,266,225 _RS19695 DZA65_RS19700: DZA65_RS19700 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 4,266,222 to 4,266,704 _RS19700
Group Condition DZA65_RS19680 DZA65_RS19685 DZA65_RS19690 DZA65_RS19695 DZA65_RS19700
control LB -1.2 -2.1 +0.0 -0.0 N.D.
plant Stem-Upstate -1.8 -1.1 -0.4 +0.1 N.D.
plant Stem-Norland -0.7 -2.4 -0.3 +0.4 N.D.
plant Stem-Norland -0.8 -1.7 -0.2 +0.1 N.D.
plant Stem-Upstate -1.3 -0.7 -0.2 -0.5 N.D.
stress 3.75mM_PTB -0.7 -1.8 +0.0 -0.2 N.D.
plant Stem-Atlantic -0.9 -1.4 -0.0 -0.1 N.D.
plant Stem-Norland -1.6 -0.9 -0.1 +0.4 N.D.
control PDB -0.7 -1.0 -0.1 -0.3 N.D.
stress 3.75mM_PTB -0.5 -1.4 -0.1 -0.0 N.D.
plant Stem-Norland -0.1 -1.5 -0.3 -0.1 N.D.
plant Stem-Norland -0.2 -1.3 -0.3 +0.1 N.D.
stress 3.75mM_PTB -0.6 -1.3 +0.0 +0.2 N.D.
control LB +0.1 -1.7 -0.0 -0.0 N.D.
plant Stem-Upstate -0.5 -1.2 +0.1 +0.1 N.D.
carbon source M9+polygalacturonate +0.5 -1.7 -0.1 +0.1 N.D.
control LB +0.2 -1.5 -0.0 +0.1 N.D.
carbon source M9+glycerol -0.2 -1.1 +0.1 +0.3 N.D.
plant Atlantic +0.1 -1.4 -0.1 +0.5 N.D.
carbon source M9+starch +0.5 -1.1 -0.2 -0.0 N.D.
carbon source M9+polygalacturonate +0.5 -1.1 +0.0 -0.1 N.D.
plant Stem-Atlantic +1.3 -1.4 -0.2 -0.3 N.D.
carbon source M9+sucrose +0.7 -1.0 -0.2 +0.0 N.D.
carbon source M9+sucrose +0.6 -0.7 -0.1 +0.3 N.D.
carbon source M9+polygalacturonate +0.8 -0.7 -0.2 +0.2 N.D.
plant Stem-Atlantic +1.2 -0.7 -0.1 -0.0 N.D.
carbon source M9+glycerol +0.2 -0.5 +0.0 +1.1 N.D.
plant Norland +0.8 -0.5 -0.0 +0.5 N.D.
plant Stem-Upstate -0.5 +0.9 +0.1 +0.3 N.D.
carbon source M9+glycerol +0.3 +0.7 +0.1 +1.1 N.D.
remove
DZA65_RS19680
plot		 remove
DZA65_RS19685
plot		 remove
DZA65_RS19690		 remove
DZA65_RS19695
plot		 remove
DZA65_RS19700
plot