Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS19545 and DZA65_RS19550 are separated by 195 nucleotidesDZA65_RS19550 and DZA65_RS19555 are separated by 36 nucleotidesDZA65_RS19555 and DZA65_RS19560 are separated by 170 nucleotidesDZA65_RS19560 and DZA65_RS19565 are separated by 119 nucleotides DZA65_RS19545: DZA65_RS19545 - ribose-5-phosphate isomerase RpiA, at 4,232,564 to 4,233,226 _RS19545 DZA65_RS19550: DZA65_RS19550 - LysR family transcriptional regulator ArgP, at 4,233,422 to 4,234,315 _RS19550 DZA65_RS19555: DZA65_RS19555 - oxidative stress defense protein, at 4,234,352 to 4,235,080 _RS19555 DZA65_RS19560: DZA65_RS19560 - helix-turn-helix domain-containing protein, at 4,235,251 to 4,236,087 _RS19560 DZA65_RS19565: DZA65_RS19565 - small-conductance mechanosensitive channel MscS, at 4,236,207 to 4,237,091 _RS19565
Group Condition DZA65_RS19545 DZA65_RS19550 DZA65_RS19555 DZA65_RS19560 DZA65_RS19565
carbon source M9+sucrose N.D. -1.2 +0.1 -0.2 -0.1
carbon source M9+sucrose N.D. -1.3 +0.0 -0.1 +0.2
carbon source M9+sucrose N.D. -1.0 -0.0 -0.2 +0.1
carbon source M9+starch N.D. -1.0 +0.1 -0.2 -0.0
carbon source M9+starch N.D. -1.0 +0.1 -0.2 +0.2
carbon source M9+glycerol N.D. -0.3 -0.1 -0.1 -0.5
plant Stem-Norland N.D. -0.5 +0.0 -0.3 -0.2
plant Stem-Norland N.D. -0.4 -0.2 +0.0 -0.3
plant Stem-Upstate N.D. -0.6 -0.0 -0.1 -0.2
plant Stem-Atlantic N.D. -0.2 -0.2 -0.2 -0.3
carbon source M9+starch N.D. -0.7 +0.0 -0.2 +0.1
plant Stem-Upstate N.D. -0.6 -0.2 +0.1 -0.0
carbon source M9+glycerol N.D. -0.4 +0.1 -0.2 -0.1
control PDB N.D. -0.1 -0.1 +0.1 -0.4
plant Stem-Atlantic N.D. -0.4 -0.2 +0.0 +0.1
carbon source M9+polygalacturonate N.D. -0.4 +0.1 -0.1 +0.0
carbon source M9+glycerol N.D. -0.3 +0.1 -0.2 +0.0
plant Stem-Atlantic N.D. -0.4 -0.0 -0.1 +0.1
plant Stem-Norland N.D. -0.5 +0.4 -0.4 +0.2
stress 1.88mM_PTB N.D. -0.1 +0.1 +0.1 -0.3
plant Atlantic N.D. +0.2 -0.0 -0.2 -0.2
plant Norland N.D. +0.2 -0.1 -0.0 -0.2
plant Stem-Atlantic N.D. -0.1 -0.1 +0.3 -0.2
control PDB N.D. -0.1 +0.2 -0.2 +0.1
plant Stem-Upstate N.D. -0.4 +0.1 +0.1 +0.3
plant Upstate N.D. +0.2 -0.2 +0.1 +0.2
control LB N.D. +0.1 +0.3 +0.1 -0.2
plant Stem-Upstate N.D. -0.3 -0.1 +0.1 +0.6
plant Upstate N.D. +0.3 +0.1 -0.1 +0.1
plant Stem-Norland N.D. -0.0 -0.0 +0.2 +0.6
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