Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS19315 and DZA65_RS19320 are separated by 64 nucleotidesDZA65_RS19320 and DZA65_RS19325 are separated by 186 nucleotidesDZA65_RS19325 and DZA65_RS19330 are separated by 98 nucleotidesDZA65_RS19330 and DZA65_RS19335 overlap by 1 nucleotides DZA65_RS19315: DZA65_RS19315 - bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA, at 4,177,146 to 4,177,799 _RS19315 DZA65_RS19320: DZA65_RS19320 - co-chaperone DjlA, at 4,177,864 to 4,178,910 _RS19320 DZA65_RS19325: DZA65_RS19325 - LPS assembly protein LptD, at 4,179,097 to 4,181,472 _RS19325 DZA65_RS19330: DZA65_RS19330 - peptidylprolyl isomerase SurA, at 4,181,571 to 4,182,863 _RS19330 DZA65_RS19335: DZA65_RS19335 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 4,182,863 to 4,183,864 _RS19335
Group Condition DZA65_RS19315 DZA65_RS19320 DZA65_RS19325 DZA65_RS19330 DZA65_RS19335
plant Stem-Norland -0.7 -0.2 N.D. N.D. -0.9
plant Stem-Norland -0.5 -0.7 N.D. N.D. -0.3
plant Stem-Upstate -0.2 -1.0 N.D. N.D. -0.2
plant Stem-Upstate -0.1 -0.8 N.D. N.D. -0.3
plant Upstate -0.5 -0.6 N.D. N.D. -0.1
control LB -0.0 -0.3 N.D. N.D. -0.8
plant Stem-Norland -0.0 -1.4 N.D. N.D. +0.4
plant Stem-Norland -0.1 -0.6 N.D. N.D. -0.3
plant Stem-Atlantic -0.4 -0.6 N.D. N.D. -0.0
plant Stem-Atlantic -0.1 -0.8 N.D. N.D. -0.2
plant Stem-Atlantic -0.6 -0.2 N.D. N.D. -0.2
plant Stem-Atlantic -0.2 -0.5 N.D. N.D. -0.2
plant Stem-Norland -0.5 -0.4 N.D. N.D. +0.1
plant Stem-Atlantic -0.1 -0.7 N.D. N.D. +0.1
plant Stem-Upstate +0.3 -1.2 N.D. N.D. +0.2
plant Stem-Upstate +0.5 -1.0 N.D. N.D. -0.2
carbon source M9+sucrose +0.5 -0.2 N.D. N.D. -0.7
carbon source M9+glycerol +0.4 -0.4 N.D. N.D. -0.4
carbon source M9+sucrose +0.5 +0.2 N.D. N.D. -1.1
plant Stem-Norland +0.3 -0.3 N.D. N.D. -0.3
plant Stem-Upstate +0.3 -0.3 N.D. N.D. -0.2
carbon source M9+sucrose +0.5 +0.2 N.D. N.D. -0.9
carbon source M9+glycerol +0.2 +0.2 N.D. N.D. -0.5
carbon source M9+glycerol +0.2 +0.3 N.D. N.D. -0.6
control PDB +0.4 +0.1 N.D. N.D. -0.4
plant Atlantic +0.4 +0.2 N.D. N.D. -0.3
plant Upstate +0.5 -0.3 N.D. N.D. +0.3
carbon source M9+starch +0.3 +0.2 N.D. N.D. +0.5
carbon source M9+starch +0.5 +0.2 N.D. N.D. +0.3
plant Stem-Norland +0.5 -0.2 N.D. N.D. +1.0
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