Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS19230 and DZA65_RS19235 are separated by 96 nucleotidesDZA65_RS19235 and DZA65_RS19240 are separated by 127 nucleotidesDZA65_RS19240 and DZA65_RS19245 are separated by 114 nucleotidesDZA65_RS19245 and DZA65_RS19250 are separated by 208 nucleotides DZA65_RS19230: DZA65_RS19230 - tryptophanase leader peptide, at 4,157,967 to 4,158,077 _RS19230 DZA65_RS19235: DZA65_RS19235 - tryptophanase, at 4,158,174 to 4,159,574 _RS19235 DZA65_RS19240: DZA65_RS19240 - hypothetical protein, at 4,159,702 to 4,159,860 _RS19240 DZA65_RS19245: DZA65_RS19245 - HTH-type transcriptional regulator SgrR, at 4,159,975 to 4,161,642 _RS19245 DZA65_RS19250: DZA65_RS19250 - thiamine ABC transporter substrate binding subunit, at 4,161,851 to 4,162,834 _RS19250
Group Condition DZA65_RS19230 DZA65_RS19235 DZA65_RS19240 DZA65_RS19245 DZA65_RS19250
plant Stem-Atlantic N.D. -0.1 -1.2 -0.1 -0.2
plant Stem-Atlantic N.D. -0.3 -0.6 -0.3 -0.2
plant Stem-Norland N.D. -0.4 -0.4 -0.3 -0.1
plant Stem-Norland N.D. -0.0 -0.8 +0.1 -0.1
plant Stem-Norland N.D. -0.0 -1.0 +0.2 +0.0
plant Stem-Upstate N.D. +0.3 -0.3 -0.4 -0.4
plant Stem-Norland N.D. +0.2 -1.0 +0.0 +0.0
plant Atlantic N.D. +0.1 -0.6 -0.0 -0.3
control PDB N.D. -0.0 -0.5 -0.2 -0.0
carbon source M9+starch N.D. -0.0 -0.6 -0.1 -0.0
carbon source M9+glycerol N.D. -0.0 -0.5 -0.2 -0.0
plant Stem-Norland N.D. -0.0 -0.8 +0.2 +0.0
plant Norland N.D. +0.1 -0.6 -0.1 +0.1
plant Atlantic N.D. +0.1 -0.6 +0.0 -0.1
carbon source M9+glycerol N.D. -0.1 -0.4 -0.2 +0.1
plant Stem-Atlantic N.D. +0.1 -0.4 -0.1 -0.1
plant Stem-Upstate N.D. +0.2 +0.3 -0.5 -0.4
carbon source M9+glycerol N.D. +0.1 -0.5 -0.0 +0.2
plant Atlantic N.D. +0.1 -0.4 +0.0 +0.2
plant Stem-Upstate N.D. -0.2 +0.3 -0.1 -0.1
plant Stem-Upstate N.D. -0.0 -0.4 +0.3 +0.1
control PDB N.D. +0.1 +0.4 -0.2 -0.1
plant Stem-Atlantic N.D. -0.1 +0.1 +0.3 -0.1
carbon source M9+polygalacturonate N.D. -0.0 +0.4 -0.3 +0.2
stress 1.88mM_PTB N.D. +0.1 -0.2 +0.1 +0.3
plant Norland N.D. +0.2 +0.3 -0.1 +0.0
plant Upstate N.D. +0.0 +0.3 -0.1 +0.3
control LB N.D. +0.1 +0.6 -0.1 +0.1
carbon source M9+starch N.D. -0.1 +0.6 +0.0 +0.1
stress 1.88mM_PTB N.D. +0.1 +0.6 +0.0 +0.1
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