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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS19200 and DZA65_RS19205 overlap by 1 nucleotides
DZA65_RS19205 and DZA65_RS19210 are separated by 2 nucleotides
DZA65_RS19210 and DZA65_RS19215 are separated by 12 nucleotides
DZA65_RS19215 and DZA65_RS19225 are separated by 399 nucleotides
DZA65_RS19200: DZA65_RS19200 - 2-isopropylmalate synthase, at 4,151,735 to 4,153,309
_RS19200
DZA65_RS19205: DZA65_RS19205 - 3-isopropylmalate dehydrogenase, at 4,153,309 to 4,154,400
_RS19205
DZA65_RS19210: DZA65_RS19210 - 3-isopropylmalate dehydratase large subunit, at 4,154,403 to 4,155,803
_RS19210
DZA65_RS19215: DZA65_RS19215 - 3-isopropylmalate dehydratase small subunit, at 4,155,816 to 4,156,418
_RS19215
DZA65_RS19225: DZA65_RS19225 - siderophore-interacting protein, at 4,156,818 to 4,157,717
_RS19225
Group
Condition
DZA65
_RS19200
DZA65
_RS19205
DZA65
_RS19210
DZA65
_RS19215
DZA65
_RS19225
carbon source
M9+polygalacturonate
-3.3
-2.9
-3.4
-4.0
+0.2
carbon source
M9+glycerol
-3.0
-2.7
-2.6
-4.6
+0.1
carbon source
M9+polygalacturonate
-3.1
-2.7
-3.2
-3.7
+0.0
carbon source
M9+sucrose
-2.7
-2.6
-3.0
-4.2
+0.0
carbon source
M9+polygalacturonate
-3.1
-2.9
-2.9
-3.4
+0.2
carbon source
M9+sucrose
-2.7
-2.4
-2.7
-3.3
-0.2
carbon source
M9+sucrose
-2.7
-2.5
-2.3
-3.6
+0.1
carbon source
M9+glycerol
-2.5
-2.5
-2.7
-2.5
-0.1
carbon source
M9+glycerol
-2.5
-2.2
-2.5
-2.9
-0.1
carbon source
M9+starch
-2.1
-2.1
-2.8
-3.0
+0.2
carbon source
M9+starch
-2.1
-2.4
-2.4
-2.7
+0.2
carbon source
M9+glycerol
-2.2
-1.9
-2.3
-2.5
+0.0
plant
Stem-Upstate
-1.5
-1.8
-1.8
-1.7
-2.0
plant
Atlantic
-1.9
-2.2
-1.9
-2.3
-0.2
carbon source
M9+glycerol
-2.0
-1.9
-1.9
-2.5
-0.1
carbon source
M9+glycerol
-2.4
-1.8
-2.0
-1.9
-0.2
plant
Stem-Upstate
-1.1
-1.7
-2.2
-1.3
-1.2
plant
Stem-Norland
-0.8
-1.5
-1.7
-1.7
-1.9
plant
Atlantic
-1.3
-1.6
-2.0
-2.7
+0.0
plant
Stem-Upstate
-1.1
-1.5
-2.2
-1.5
-1.1
carbon source
M9+starch
-1.9
-1.9
-1.9
-1.9
+0.2
plant
Stem-Upstate
-0.9
-1.4
-1.7
-1.9
-1.1
plant
Atlantic
-1.3
-1.5
-1.6
-1.9
+0.0
plant
Stem-Atlantic
-0.7
-1.1
-0.8
-1.9
-1.7
plant
Atlantic
-1.2
-1.6
-1.6
-1.7
+0.0
plant
Atlantic
-1.4
-1.2
-1.3
-1.4
-0.3
plant
Stem-Norland
-0.1
-0.8
-1.2
-1.8
-1.7
plant
Norland
-0.9
-1.1
-1.4
-2.1
-0.1
plant
Atlantic
-1.1
-1.4
-1.5
-1.4
+0.0
plant
Stem-Atlantic
-0.5
-0.8
-1.1
-1.3
-1.1
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