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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS19090 and DZA65_RS19095 are separated by 16 nucleotides
DZA65_RS19095 and DZA65_RS19100 are separated by 94 nucleotides
DZA65_RS19100 and DZA65_RS19105 are separated by 74 nucleotides
DZA65_RS19105 and DZA65_RS19110 overlap by 4 nucleotides
DZA65_RS19090: DZA65_RS19090 - DUF721 domain-containing protein, at 4,126,590 to 4,127,111
_RS19090
DZA65_RS19095: DZA65_RS19095 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 4,127,128 to 4,128,045
_RS19095
DZA65_RS19100: DZA65_RS19100 - cell division protein FtsZ, at 4,128,140 to 4,129,291
_RS19100
DZA65_RS19105: DZA65_RS19105 - cell division protein FtsA, at 4,129,366 to 4,130,622
_RS19105
DZA65_RS19110: DZA65_RS19110 - cell division protein FtsQ, at 4,130,619 to 4,131,473
_RS19110
Group
Condition
DZA65
_RS19090
DZA65
_RS19095
DZA65
_RS19100
DZA65
_RS19105
DZA65
_RS19110
plant
Stem-Norland
-1.2
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.9
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-0.7
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.7
N.D.
N.D.
N.D.
N.D.
plant
Norland
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.5
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-0.5
N.D.
N.D.
N.D.
N.D.
stress
3.75mM_PTB
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.4
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.4
N.D.
N.D.
N.D.
N.D.
plant
Stem-Upstate
-0.4
N.D.
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.4
N.D.
N.D.
N.D.
N.D.
stress
3.75mM_PTB
-0.4
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
-0.3
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.3
N.D.
N.D.
N.D.
N.D.
control
LB
+0.3
N.D.
N.D.
N.D.
N.D.
control
PDB
+0.4
N.D.
N.D.
N.D.
N.D.
plant
Upstate
+0.4
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
+0.4
N.D.
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.4
N.D.
N.D.
N.D.
N.D.
control
PDB
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.4
N.D.
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
+0.4
N.D.
N.D.
N.D.
N.D.
plant
Stem-Norland
+0.5
N.D.
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
+0.6
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
+0.6
N.D.
N.D.
N.D.
N.D.
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