Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS19035 and DZA65_RS19040 are separated by 261 nucleotidesDZA65_RS19040 and DZA65_RS19045 are separated by 5 nucleotidesDZA65_RS19045 and DZA65_RS19050 are separated by 9 nucleotidesDZA65_RS19050 and DZA65_RS19055 are separated by 115 nucleotides DZA65_RS19035: DZA65_RS19035 - carboxylating nicotinate-nucleotide diphosphorylase, at 4,115,557 to 4,116,447 _RS19035 DZA65_RS19040: DZA65_RS19040 - prepilin peptidase-dependent pilin, at 4,116,709 to 4,117,152 _RS19040 DZA65_RS19045: DZA65_RS19045 - type II secretion system protein GspE, at 4,117,158 to 4,118,579 _RS19045 DZA65_RS19050: DZA65_RS19050 - protein transport protein HofC, at 4,118,589 to 4,119,794 _RS19050 DZA65_RS19055: DZA65_RS19055 - GMP reductase, at 4,119,910 to 4,120,950 _RS19055
Group Condition DZA65_RS19035 DZA65_RS19040 DZA65_RS19045 DZA65_RS19050 DZA65_RS19055
carbon source M9+sucrose -2.5 -0.0 -0.3 +0.1 +0.1
carbon source M9+sucrose -2.2 -0.2 +0.1 +0.2 -0.1
carbon source M9+polygalacturonate -1.6 -0.1 -0.1 -0.1 -0.1
carbon source M9+sucrose -2.0 -0.0 +0.1 +0.1 +0.0
carbon source M9+polygalacturonate -1.9 +0.0 +0.0 -0.0 +0.1
carbon source M9+polygalacturonate -1.8 +0.1 +0.0 +0.1 +0.2
carbon source M9+glycerol -1.0 -0.0 -0.0 +0.1 -0.1
carbon source M9+glycerol -0.7 +0.1 -0.1 -0.0 -0.0
carbon source M9+glycerol -0.8 +0.1 -0.2 +0.0 +0.2
carbon source M9+glycerol -0.8 -0.0 +0.0 +0.1 -0.1
carbon source M9+glycerol -0.8 -0.0 +0.1 +0.1 +0.0
carbon source M9+glycerol -0.8 +0.2 -0.1 +0.0 +0.2
carbon source M9+starch -0.5 -0.0 +0.2 +0.1 -0.0
plant Stem-Upstate +0.3 -0.1 +0.1 -0.5 +0.0
carbon source M9+starch -0.5 +0.3 -0.1 -0.0 +0.1
plant Stem-Upstate +0.5 -0.1 -0.2 -0.3 +0.0
control PDB -0.0 +0.2 -0.2 +0.2 -0.2
plant Stem-Upstate +0.2 -0.2 -0.0 +0.3 -0.3
plant Atlantic -0.2 +0.1 -0.2 +0.2 -0.1
control LB +0.0 +0.3 -0.1 -0.2 +0.1
plant Stem-Upstate +0.4 -0.3 -0.2 -0.0 +0.3
stress 1.88mM_PTB +0.2 -0.0 +0.3 -0.2 +0.1
plant Norland +0.0 +0.4 -0.2 +0.1 +0.1
stress 1.88mM_PTB +0.2 +0.1 +0.3 -0.0 -0.1
plant Stem-Upstate +0.2 -0.1 +0.2 +0.2 -0.0
plant Stem-Upstate +0.3 +0.2 +0.3 -0.1 -0.1
plant Upstate -0.1 +0.5 -0.0 +0.2 +0.0
plant Stem-Norland +0.3 -0.0 -0.1 +0.2 +0.2
plant Stem-Norland +0.3 +0.2 +0.1 +0.0 +0.2
plant Stem-Upstate +0.5 +0.0 +0.4 +0.0 +0.0
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