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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS18930 and DZA65_RS18935 are separated by 97 nucleotides
DZA65_RS18935 and DZA65_RS18940 are separated by 37 nucleotides
DZA65_RS18940 and DZA65_RS18945 are separated by 6 nucleotides
DZA65_RS18945 and DZA65_RS18950 are separated by 160 nucleotides
DZA65_RS18930: DZA65_RS18930 - iron-containing alcohol dehydrogenase, at 4,088,588 to 4,089,724
_RS18930
DZA65_RS18935: DZA65_RS18935 - dihydrodipicolinate synthase family protein, at 4,089,822 to 4,090,706
_RS18935
DZA65_RS18940: DZA65_RS18940 - sodium:solute symporter family protein, at 4,090,744 to 4,092,165
_RS18940
DZA65_RS18945: DZA65_RS18945 - glycosyl hydrolase, at 4,092,172 to 4,093,347
_RS18945
DZA65_RS18950: DZA65_RS18950 - YhcH/YjgK/YiaL family protein, at 4,093,508 to 4,093,981
_RS18950
Group
Condition
DZA65
_RS18930
DZA65
_RS18935
DZA65
_RS18940
DZA65
_RS18945
DZA65
_RS18950
plant
Stem-Upstate
-0.6
-0.2
+0.0
-0.3
-0.2
plant
Stem-Upstate
-0.5
-0.5
-0.2
-0.4
+0.5
plant
Stem-Norland
-0.4
-0.4
-0.1
-0.0
-0.1
carbon source
M9+glycerol
+0.0
-0.1
+0.0
-0.3
-0.5
plant
Stem-Upstate
-0.4
-0.2
-0.1
-0.4
+0.3
control
LB
-0.2
-0.1
-0.1
-0.3
-0.1
carbon source
M9+glycerol
-0.0
-0.4
-0.0
-0.1
-0.1
plant
Atlantic
-0.3
-0.1
+0.0
-0.2
+0.0
plant
Stem-Norland
-0.1
-0.2
+0.2
-0.4
+0.0
plant
Norland
-0.1
-0.1
-0.2
-0.3
+0.2
plant
Upstate
-0.2
+0.0
-0.1
-0.4
+0.1
plant
Stem-Atlantic
-0.2
-0.2
+0.0
+0.1
-0.2
plant
Stem-Atlantic
-0.2
+0.3
-0.1
-0.3
-0.1
plant
Stem-Norland
+0.1
-0.4
+0.1
-0.0
+0.1
plant
Stem-Norland
+0.2
-0.4
+0.2
-0.2
+0.1
plant
Norland
-0.3
+0.2
-0.1
+0.0
+0.1
plant
Stem-Upstate
+0.0
+0.1
+0.2
-0.5
+0.2
plant
Stem-Atlantic
+0.1
-0.2
-0.1
+0.2
-0.1
plant
Atlantic
-0.0
+0.1
+0.0
-0.3
+0.2
plant
Stem-Upstate
-0.2
-0.2
+0.1
+0.0
+0.4
plant
Stem-Atlantic
-0.1
-0.2
-0.0
+0.4
+0.1
plant
Stem-Atlantic
-0.1
-0.2
-0.1
+0.5
+0.0
plant
Upstate
-0.0
+0.3
+0.1
-0.4
+0.1
plant
Stem-Norland
+0.1
-0.2
-0.0
+0.1
+0.3
plant
Stem-Norland
-0.3
+0.3
+0.2
-0.3
+0.4
plant
Stem-Norland
+0.1
-0.0
-0.2
+0.6
-0.2
control
LB
+0.2
+0.1
+0.1
+0.1
+0.2
plant
Stem-Upstate
-0.1
-0.2
+0.2
+0.5
+0.3
plant
Stem-Norland
+0.1
+0.1
+0.0
+0.4
+0.1
plant
Stem-Upstate
+0.2
+0.4
+0.2
+0.5
-0.3
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