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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS18835 and DZA65_RS18840 are separated by 163 nucleotides
DZA65_RS18840 and DZA65_RS18845 overlap by 4 nucleotides
DZA65_RS18845 and DZA65_RS18850 are separated by 180 nucleotides
DZA65_RS18850 and DZA65_RS18855 are separated by 0 nucleotides
DZA65_RS18835: DZA65_RS18835 - hypothetical protein, at 4,065,834 to 4,068,302
_RS18835
DZA65_RS18840: DZA65_RS18840 - hypothetical protein, at 4,068,466 to 4,069,014
_RS18840
DZA65_RS18845: DZA65_RS18845 - ATP-binding protein, at 4,069,011 to 4,070,009
_RS18845
DZA65_RS18850: DZA65_RS18850 - LacI family transcriptional regulator, at 4,070,190 to 4,071,221
_RS18850
DZA65_RS18855: DZA65_RS18855 - carbohydrate ABC transporter permease, at 4,071,222 to 4,072,274
_RS18855
Group
Condition
DZA65
_RS18835
DZA65
_RS18840
DZA65
_RS18845
DZA65
_RS18850
DZA65
_RS18855
plant
Stem-Atlantic
+0.0
-0.4
-0.1
-0.2
-0.4
control
LB
+0.0
-0.4
-0.2
-0.1
-0.1
plant
Stem-Norland
-0.2
+0.0
-0.3
-0.2
-0.2
control
LB
-0.0
-0.1
-0.3
+0.1
-0.2
carbon source
M9+glycerol
-0.1
+0.1
-0.2
-0.1
-0.1
plant
Stem-Upstate
+0.0
+0.2
-0.2
-0.3
+0.1
control
LB
-0.1
+0.2
+0.3
-0.3
-0.2
stress
3.75mM_PTB
+0.2
+0.2
-0.4
-0.0
+0.0
plant
Upstate
-0.1
+0.0
+0.3
-0.3
+0.1
plant
Stem-Upstate
+0.1
-0.5
+0.3
+0.0
+0.0
plant
Stem-Norland
-0.1
+0.3
+0.2
-0.1
-0.2
plant
Norland
+0.1
+0.1
+0.2
-0.1
-0.3
plant
Stem-Norland
-0.1
+0.3
+0.2
-0.2
-0.1
plant
Stem-Upstate
+0.1
-0.3
+0.4
+0.1
-0.1
plant
Norland
-0.1
+0.2
+0.1
-0.3
+0.3
plant
Stem-Norland
+0.1
-0.2
+0.4
+0.0
-0.1
plant
Norland
+0.1
+0.0
+0.3
-0.1
-0.1
plant
Stem-Norland
+0.2
-0.8
+0.8
+0.3
-0.2
plant
Upstate
+0.1
-0.2
+0.5
+0.1
-0.1
plant
Stem-Upstate
+0.2
+0.6
-0.3
+0.2
-0.2
plant
Stem-Upstate
+0.1
-0.2
+0.3
+0.2
+0.1
plant
Stem-Norland
+0.1
-0.3
+0.6
+0.3
-0.1
plant
Stem-Atlantic
+0.0
+0.4
+0.5
-0.3
+0.0
plant
Stem-Atlantic
+0.1
+0.4
+0.1
+0.3
-0.2
plant
Stem-Atlantic
-0.1
+0.1
+0.4
+0.1
+0.2
plant
Upstate
+0.1
+0.4
+0.2
-0.0
+0.1
plant
Stem-Norland
-0.0
+0.4
-0.0
+0.4
+0.1
plant
Atlantic
+0.1
+0.1
+0.3
+0.2
+0.2
plant
Stem-Upstate
+0.2
-0.0
+0.6
+0.3
+0.4
carbon source
M9+sucrose
+0.2
+0.4
+0.3
+0.3
+0.3
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DZA65_RS18845
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