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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS18640 and DZA65_RS18645 are separated by 120 nucleotides
DZA65_RS18645 and DZA65_RS18650 are separated by 90 nucleotides
DZA65_RS18650 and DZA65_RS18655 are separated by 178 nucleotides
DZA65_RS18655 and DZA65_RS18660 are separated by 243 nucleotides
DZA65_RS18640: DZA65_RS18640 - quinone oxidoreductase, at 4,014,825 to 4,015,826
_RS18640
DZA65_RS18645: DZA65_RS18645 - replicative DNA helicase, at 4,015,947 to 4,017,350
_RS18645
DZA65_RS18650: DZA65_RS18650 - alanine racemase, at 4,017,441 to 4,018,517
_RS18650
DZA65_RS18655: DZA65_RS18655 - DUF1471 domain-containing protein, at 4,018,696 to 4,018,944
_RS18655
DZA65_RS18660: DZA65_RS18660 - transporter substrate-binding domain-containing protein, at 4,019,188 to 4,019,955
_RS18660
Group
Condition
DZA65
_RS18640
DZA65
_RS18645
DZA65
_RS18650
DZA65
_RS18655
DZA65
_RS18660
plant
Stem-Atlantic
+0.1
N.D.
-3.5
-0.8
+0.1
plant
Stem-Norland
+0.0
N.D.
-1.9
-1.8
+0.0
plant
Stem-Norland
-0.0
N.D.
-3.1
-0.2
-0.1
plant
Stem-Upstate
+0.2
N.D.
-1.9
-1.7
+0.2
plant
Stem-Norland
-0.2
N.D.
-2.9
-0.2
-0.0
plant
Atlantic
+0.1
N.D.
-2.1
-1.0
-0.0
plant
Stem-Atlantic
-0.1
N.D.
-3.3
+0.3
+0.2
plant
Upstate
-0.0
N.D.
-1.2
-2.0
+0.2
plant
Stem-Upstate
-0.0
N.D.
-2.7
+0.1
-0.1
plant
Stem-Norland
+0.4
N.D.
-2.7
-0.7
+0.4
plant
Upstate
+0.2
N.D.
-2.6
-0.4
+0.2
plant
Atlantic
+0.1
N.D.
-2.1
-0.7
+0.1
plant
Stem-Atlantic
+0.0
N.D.
-2.3
-0.3
+0.1
plant
Norland
+0.1
N.D.
-2.7
+0.3
-0.1
plant
Upstate
+0.1
N.D.
-2.3
-0.3
+0.1
plant
Stem-Norland
+0.2
N.D.
-2.6
-0.1
+0.3
plant
Atlantic
+0.1
N.D.
-2.3
-0.0
+0.1
plant
Atlantic
+0.1
N.D.
-2.7
+0.3
+0.1
plant
Stem-Norland
+0.0
N.D.
-3.3
+1.0
+0.2
plant
Norland
+0.2
N.D.
-2.1
+0.1
-0.1
plant
Stem-Atlantic
-0.1
N.D.
-2.1
+0.5
-0.2
plant
Stem-Upstate
+0.1
N.D.
-2.6
+0.6
+0.2
plant
Stem-Upstate
+0.1
N.D.
-2.6
+0.5
+0.2
plant
Atlantic
+0.2
N.D.
-2.1
+0.2
+0.3
plant
Stem-Norland
+0.0
N.D.
-2.4
+1.0
+0.1
plant
Stem-Upstate
+0.3
N.D.
-1.8
+0.6
-0.0
plant
Stem-Upstate
+0.1
N.D.
-1.8
+0.8
+0.1
plant
Stem-Atlantic
+0.1
N.D.
-1.7
+0.7
+0.1
plant
Atlantic
+0.2
N.D.
-2.0
+1.0
+0.0
control
LB
+0.3
N.D.
+1.0
+1.2
-0.1
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