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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS18185 and DZA65_RS18190 are separated by 681 nucleotides
DZA65_RS18190 and DZA65_RS18195 are separated by 574 nucleotides
DZA65_RS18195 and DZA65_RS18200 are separated by 158 nucleotides
DZA65_RS18200 and DZA65_RS18210 are separated by 208 nucleotides
DZA65_RS18185: DZA65_RS18185 - MFS transporter, at 3,919,595 to 3,920,947
_RS18185
DZA65_RS18190: DZA65_RS18190 - galactarate dehydratase, at 3,921,629 to 3,923,203
_RS18190
DZA65_RS18195: DZA65_RS18195 - PAS domain-containing protein, at 3,923,778 to 3,925,313
_RS18195
DZA65_RS18200: DZA65_RS18200 - hypothetical protein, at 3,925,472 to 3,925,804
_RS18200
DZA65_RS18210: DZA65_RS18210 - IS200/IS605 family transposase, at 3,926,013 to 3,926,471
_RS18210
Group
Condition
DZA65
_RS18185
DZA65
_RS18190
DZA65
_RS18195
DZA65
_RS18200
DZA65
_RS18210
plant
Stem-Upstate
+0.1
+0.0
+0.4
-2.4
N.D.
plant
Stem-Norland
-0.2
+0.1
+0.2
-1.6
N.D.
plant
Stem-Norland
-0.1
-0.1
+0.0
-1.0
N.D.
plant
Atlantic
-0.0
-0.3
-0.1
-0.6
N.D.
plant
Stem-Atlantic
-0.1
-0.1
+0.1
-0.6
N.D.
plant
Stem-Upstate
-0.1
+0.1
+0.2
-0.7
N.D.
plant
Stem-Atlantic
-0.1
-0.0
+0.1
-0.6
N.D.
plant
Stem-Norland
-0.2
-0.0
+0.2
-0.6
N.D.
plant
Stem-Atlantic
+0.1
-0.2
+0.1
-0.6
N.D.
control
LB
-0.1
+0.0
+0.1
-0.6
N.D.
plant
Stem-Upstate
-0.2
+0.3
+0.0
-0.6
N.D.
carbon source
M9+glycerol
-0.2
+0.2
-0.0
-0.5
N.D.
plant
Atlantic
+0.1
-0.0
+0.1
-0.6
N.D.
plant
Atlantic
+0.0
+0.1
+0.1
-0.7
N.D.
control
PDB
-0.1
+0.2
+0.0
-0.5
N.D.
carbon source
M9+polygalacturonate
-0.2
-0.1
+0.1
+0.5
N.D.
plant
Stem-Atlantic
-0.0
-0.2
+0.1
+0.7
N.D.
plant
Stem-Norland
-0.2
+0.1
-0.1
+0.7
N.D.
control
LB
+0.0
-0.0
-0.3
+1.0
N.D.
plant
Stem-Upstate
-0.1
-0.0
+0.2
+0.6
N.D.
control
LB
+0.1
+0.0
-0.1
+0.9
N.D.
control
PDB
+0.0
-0.1
+0.2
+0.8
N.D.
plant
Stem-Upstate
-0.1
+0.5
-0.1
+0.6
N.D.
carbon source
M9+sucrose
-0.1
+0.0
+0.2
+0.9
N.D.
carbon source
M9+polygalacturonate
-0.0
+0.0
+0.3
+0.9
N.D.
carbon source
M9+sucrose
+0.0
+0.1
+0.0
+1.2
N.D.
carbon source
M9+starch
-0.0
-0.0
+0.3
+1.1
N.D.
carbon source
M9+starch
-0.1
+0.0
+0.2
+1.3
N.D.
carbon source
M9+sucrose
+0.0
+0.0
+0.4
+0.9
N.D.
carbon source
M9+starch
+0.0
-0.1
+0.1
+1.7
N.D.
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