Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS17350 and DZA65_RS17355 are separated by 27 nucleotidesDZA65_RS17355 and DZA65_RS17360 are separated by 827 nucleotidesDZA65_RS17360 and DZA65_RS17365 are separated by 76 nucleotidesDZA65_RS17365 and DZA65_RS17370 are separated by 63 nucleotides DZA65_RS17350: DZA65_RS17350 - bifunctional chorismate mutase/prephenate dehydrogenase, at 3,740,743 to 3,741,861 _RS17350 DZA65_RS17355: DZA65_RS17355 - 3-deoxy-7-phosphoheptulonate synthase, at 3,741,889 to 3,742,953 _RS17355 DZA65_RS17360: DZA65_RS17360 - class I SAM-dependent methyltransferase, at 3,743,781 to 3,744,731 _RS17360 DZA65_RS17365: DZA65_RS17365 - 50S ribosomal protein L19, at 3,744,808 to 3,745,155 _RS17365 DZA65_RS17370: DZA65_RS17370 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 3,745,219 to 3,745,974 _RS17370
Group Condition DZA65_RS17350 DZA65_RS17355 DZA65_RS17360 DZA65_RS17365 DZA65_RS17370
plant Stem-Upstate N.D. N.D. -0.3 N.D. N.D.
control LB N.D. N.D. -0.2 N.D. N.D.
plant Stem-Upstate N.D. N.D. -0.2 N.D. N.D.
control LB N.D. N.D. -0.2 N.D. N.D.
control PDB N.D. N.D. -0.1 N.D. N.D.
plant Norland N.D. N.D. -0.1 N.D. N.D.
plant Upstate N.D. N.D. -0.1 N.D. N.D.
control LB N.D. N.D. -0.1 N.D. N.D.
control PDB N.D. N.D. -0.1 N.D. N.D.
stress 3.75mM_PTB N.D. N.D. -0.1 N.D. N.D.
stress 1.88mM_PTB N.D. N.D. -0.1 N.D. N.D.
control LB N.D. N.D. -0.1 N.D. N.D.
carbon source M9+polygalacturonate N.D. N.D. +0.1 N.D. N.D.
plant Stem-Norland N.D. N.D. +0.1 N.D. N.D.
stress 3.75mM_PTB N.D. N.D. +0.1 N.D. N.D.
plant Stem-Norland N.D. N.D. +0.1 N.D. N.D.
plant Stem-Atlantic N.D. N.D. +0.1 N.D. N.D.
plant Stem-Atlantic N.D. N.D. +0.1 N.D. N.D.
control LB N.D. N.D. +0.1 N.D. N.D.
plant Stem-Norland N.D. N.D. +0.2 N.D. N.D.
carbon source M9+polygalacturonate N.D. N.D. +0.2 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.2 N.D. N.D.
plant Upstate N.D. N.D. +0.2 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.2 N.D. N.D.
plant Atlantic N.D. N.D. +0.2 N.D. N.D.
plant Upstate N.D. N.D. +0.2 N.D. N.D.
carbon source M9+sucrose N.D. N.D. +0.3 N.D. N.D.
plant Stem-Norland N.D. N.D. +0.3 N.D. N.D.
plant Stem-Norland N.D. N.D. +0.4 N.D. N.D.
plant Stem-Upstate N.D. N.D. +0.5 N.D. N.D.
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