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Protein
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Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS17335 and DZA65_RS17340 are separated by 299 nucleotides
DZA65_RS17340 and DZA65_RS17345 are separated by 345 nucleotides
DZA65_RS17345 and DZA65_RS17350 are separated by 112 nucleotides
DZA65_RS17350 and DZA65_RS17355 are separated by 27 nucleotides
DZA65_RS17335: DZA65_RS17335 - outer membrane protein assembly factor BamD, at 3,737,755 to 3,738,489
_RS17335
DZA65_RS17340: DZA65_RS17340 - ribosome-associated translation inhibitor RaiA, at 3,738,789 to 3,739,127
_RS17340
DZA65_RS17345: DZA65_RS17345 - bifunctional chorismate mutase/prephenate dehydratase, at 3,739,473 to 3,740,630
_RS17345
DZA65_RS17350: DZA65_RS17350 - bifunctional chorismate mutase/prephenate dehydrogenase, at 3,740,743 to 3,741,861
_RS17350
DZA65_RS17355: DZA65_RS17355 - 3-deoxy-7-phosphoheptulonate synthase, at 3,741,889 to 3,742,953
_RS17355
Group
Condition
DZA65
_RS17335
DZA65
_RS17340
DZA65
_RS17345
DZA65
_RS17350
DZA65
_RS17355
carbon source
M9+polygalacturonate
N.D.
+0.0
-3.0
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.1
-2.8
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.1
-2.9
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.1
-2.9
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-2.8
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.0
-2.7
N.D.
N.D.
carbon source
M9+sucrose
N.D.
-0.0
-2.5
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.1
-2.6
N.D.
N.D.
plant
Stem-Norland
N.D.
+0.0
-2.5
N.D.
N.D.
plant
Atlantic
N.D.
+0.1
-2.5
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-2.6
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.0
-2.4
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.1
-2.5
N.D.
N.D.
carbon source
M9+sucrose
N.D.
-0.0
-2.3
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-2.4
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-2.4
N.D.
N.D.
plant
Stem-Atlantic
N.D.
-0.0
-2.2
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.0
-2.2
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-2.4
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.3
-1.8
N.D.
N.D.
plant
Stem-Atlantic
N.D.
-0.0
-2.1
N.D.
N.D.
carbon source
M9+starch
N.D.
+0.1
-2.2
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.2
-2.3
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.1
-2.1
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.4
-2.3
N.D.
N.D.
plant
Stem-Norland
N.D.
-0.1
-1.8
N.D.
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-2.0
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.1
-1.9
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-1.8
N.D.
N.D.
plant
Stem-Upstate
N.D.
+0.2
-1.8
N.D.
N.D.
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