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Gene
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Nearby
Cofit
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS17295 and DZA65_RS17300 are separated by 159 nucleotides
DZA65_RS17300 and DZA65_RS17305 are separated by 100 nucleotides
DZA65_RS17305 and DZA65_RS17310 are separated by 65 nucleotides
DZA65_RS17310 and DZA65_RS17320 are separated by 453 nucleotides
DZA65_RS17295: DZA65_RS17295 - 23S ribosomal RNA, at 3,727,688 to 3,730,711
_RS17295
DZA65_RS17300: DZA65_RS17300 - tRNA-Ala, at 3,730,871 to 3,730,946
_RS17300
DZA65_RS17305: DZA65_RS17305 - tRNA-Ile, at 3,731,047 to 3,731,123
_RS17305
DZA65_RS17310: DZA65_RS17310 - 16S ribosomal RNA, at 3,731,189 to 3,732,736
_RS17310
DZA65_RS17320: DZA65_RS17320 - ATP-dependent chaperone ClpB, at 3,733,190 to 3,735,763
_RS17320
Group
Condition
DZA65
_RS17295
DZA65
_RS17300
DZA65
_RS17305
DZA65
_RS17310
DZA65
_RS17320
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.2
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.1
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.1
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.1
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Upstate
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.2
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Upstate
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Stem-Upstate
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.4
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