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Gene
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Nearby
Cofit
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS17275 and DZA65_RS17280 are separated by 193 nucleotides
DZA65_RS17280 and DZA65_RS17285 are separated by 228 nucleotides
DZA65_RS17285 and DZA65_RS17290 are separated by 66 nucleotides
DZA65_RS17290 and DZA65_RS17295 are separated by 101 nucleotides
DZA65_RS17275: DZA65_RS17275 - transposase, at 3,725,542 to 3,726,114
_RS17275
DZA65_RS17280: DZA65_RS17280 - endonuclease/exonuclease/phosphatase family protein, at 3,726,308 to 3,727,099
_RS17280
DZA65_RS17285: DZA65_RS17285 - tRNA-Asp, at 3,727,328 to 3,727,404
_RS17285
DZA65_RS17290: DZA65_RS17290 - 5S ribosomal RNA, at 3,727,471 to 3,727,586
_RS17290
DZA65_RS17295: DZA65_RS17295 - 23S ribosomal RNA, at 3,727,688 to 3,730,711
_RS17295
Group
Condition
DZA65
_RS17275
DZA65
_RS17280
DZA65
_RS17285
DZA65
_RS17290
DZA65
_RS17295
plant
Stem-Upstate
-0.3
-0.2
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.1
-0.5
N.D.
N.D.
N.D.
carbon source
M9+starch
-0.1
-0.2
N.D.
N.D.
N.D.
plant
Stem-Atlantic
-0.2
-0.2
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.1
-0.5
N.D.
N.D.
N.D.
stress
3.75mM_PTB
+0.2
-0.5
N.D.
N.D.
N.D.
plant
Stem-Norland
-0.4
+0.2
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.0
-0.3
N.D.
N.D.
N.D.
stress
3.75mM_PTB
+0.1
-0.4
N.D.
N.D.
N.D.
stress
3.75mM_PTB
+0.1
-0.4
N.D.
N.D.
N.D.
stress
3.75mM_PTB
+0.2
-0.3
N.D.
N.D.
N.D.
control
LB
+0.2
-0.3
N.D.
N.D.
N.D.
plant
Norland
-0.2
+0.2
N.D.
N.D.
N.D.
plant
Stem-Norland
+0.2
-0.1
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.2
+0.3
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.2
+0.4
N.D.
N.D.
N.D.
plant
Atlantic
-0.1
+0.3
N.D.
N.D.
N.D.
carbon source
M9+starch
+0.3
-0.1
N.D.
N.D.
N.D.
stress
1.88mM_PTB
+0.3
-0.0
N.D.
N.D.
N.D.
plant
Norland
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.0
+0.3
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.1
+0.3
N.D.
N.D.
N.D.
plant
Stem-Upstate
+0.3
+0.0
N.D.
N.D.
N.D.
plant
Stem-Atlantic
+0.2
+0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.0
+0.4
N.D.
N.D.
N.D.
plant
Stem-Atlantic
+0.2
+0.1
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.1
+0.5
N.D.
N.D.
N.D.
carbon source
M9+sucrose
+0.4
+0.3
N.D.
N.D.
N.D.
carbon source
M9+sucrose
+0.2
+0.6
N.D.
N.D.
N.D.
plant
Stem-Upstate
+0.6
+0.3
N.D.
N.D.
N.D.
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