Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS17135 and DZA65_RS17140 are separated by 93 nucleotidesDZA65_RS17140 and DZA65_RS17145 are separated by 68 nucleotidesDZA65_RS17145 and DZA65_RS17150 overlap by 4 nucleotidesDZA65_RS17150 and DZA65_RS17155 are separated by 160 nucleotides DZA65_RS17135: DZA65_RS17135 - RNA polymerase-binding protein DksA, at 3,701,872 to 3,702,327 _RS17135 DZA65_RS17140: DZA65_RS17140 - tRNA glutamyl-Q(34) synthetase GluQRS, at 3,702,421 to 3,703,329 _RS17140 DZA65_RS17145: DZA65_RS17145 - polynucleotide adenylyltransferase PcnB, at 3,703,398 to 3,704,801 _RS17145 DZA65_RS17150: DZA65_RS17150 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 3,704,798 to 3,705,286 _RS17150 DZA65_RS17155: DZA65_RS17155 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,705,447 to 3,706,241 _RS17155
Group Condition DZA65_RS17135 DZA65_RS17140 DZA65_RS17145 DZA65_RS17150 DZA65_RS17155
carbon source M9+polygalacturonate N.D. -0.1 -0.8 N.D. -3.3
carbon source M9+polygalacturonate N.D. +0.1 -0.7 N.D. -3.3
carbon source M9+polygalacturonate N.D. -0.1 -0.4 N.D. -3.3
carbon source M9+sucrose N.D. -0.0 -0.6 N.D. -2.6
carbon source M9+starch N.D. +0.0 -0.4 N.D. -2.6
carbon source M9+starch N.D. +0.1 -0.5 N.D. -2.6
carbon source M9+sucrose N.D. -0.0 -0.5 N.D. -2.3
carbon source M9+sucrose N.D. -0.1 -0.3 N.D. -2.3
carbon source M9+starch N.D. +0.1 -0.4 N.D. -2.1
carbon source M9+glycerol N.D. -0.1 +0.5 N.D. -2.2
carbon source M9+glycerol N.D. +0.1 +0.4 N.D. -2.2
carbon source M9+glycerol N.D. +0.1 +0.4 N.D. -2.2
carbon source M9+glycerol N.D. -0.1 +0.3 N.D. -1.8
carbon source M9+glycerol N.D. +0.2 +0.5 N.D. -2.2
plant Upstate N.D. -0.1 -1.2 N.D. -0.1
carbon source M9+glycerol N.D. +0.3 +0.4 N.D. -1.9
control PDB N.D. -0.2 -0.9 N.D. -0.1
plant Stem-Upstate N.D. +0.3 -0.4 N.D. -1.0
plant Upstate N.D. -0.2 -0.5 N.D. -0.3
plant Stem-Norland N.D. -0.1 -0.6 N.D. -0.2
plant Upstate N.D. -0.2 -0.6 N.D. -0.1
plant Stem-Upstate N.D. -0.4 -0.1 N.D. -0.5
plant Atlantic N.D. +0.1 -0.8 N.D. -0.2
plant Atlantic N.D. -0.1 -0.6 N.D. -0.2
plant Stem-Norland N.D. +0.1 -1.0 N.D. -0.0
plant Stem-Upstate N.D. +0.2 -0.8 N.D. -0.3
control PDB N.D. -0.1 -0.7 N.D. +0.1
plant Stem-Upstate N.D. +0.2 -0.8 N.D. -0.0
stress 1.88mM_PTB N.D. -0.2 -0.6 N.D. +0.1
plant Upstate N.D. -0.1 -0.6 N.D. +0.3
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