Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS17085 and DZA65_RS17090 are separated by 163 nucleotidesDZA65_RS17090 and DZA65_RS17095 are separated by 217 nucleotidesDZA65_RS17095 and DZA65_RS17100 are separated by 91 nucleotidesDZA65_RS17100 and DZA65_RS17105 are separated by 110 nucleotides DZA65_RS17085: DZA65_RS17085 - serine endoprotease DegP, at 3,688,103 to 3,689,554 _RS17085 DZA65_RS17090: DZA65_RS17090 - dGTPase, at 3,689,718 to 3,691,235 _RS17090 DZA65_RS17095: DZA65_RS17095 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 3,691,453 to 3,692,154 _RS17095 DZA65_RS17100: DZA65_RS17100 - vitamin B12 ABC transporter substrate-binding protein BtuF, at 3,692,246 to 3,693,028 _RS17100 DZA65_RS17105: DZA65_RS17105 - iron-sulfur cluster insertion protein ErpA, at 3,693,139 to 3,693,483 _RS17105
Group Condition DZA65_RS17085 DZA65_RS17090 DZA65_RS17095 DZA65_RS17100 DZA65_RS17105
plant Stem-Upstate +0.2 +0.0 N.D. -1.1 N.D.
plant Stem-Norland -0.1 -0.2 N.D. -0.5 N.D.
plant Stem-Upstate -0.0 -0.2 N.D. -0.6 N.D.
plant Upstate -0.2 +0.1 N.D. -0.6 N.D.
carbon source M9+sucrose -0.0 -0.0 N.D. -0.7 N.D.
control PDB -0.1 -0.0 N.D. -0.7 N.D.
plant Stem-Norland -0.0 +0.0 N.D. -0.7 N.D.
carbon source M9+polygalacturonate +0.1 -0.1 N.D. -0.7 N.D.
carbon source M9+starch +0.0 -0.1 N.D. -0.5 N.D.
control PDB -0.1 -0.0 N.D. -0.5 N.D.
control LB -0.1 -0.1 N.D. -0.4 N.D.
plant Stem-Atlantic +0.1 +0.0 N.D. -0.6 N.D.
plant Stem-Atlantic +0.1 -0.0 N.D. -0.5 N.D.
plant Stem-Upstate +0.4 +0.1 N.D. -0.9 N.D.
carbon source M9+polygalacturonate +0.1 -0.0 N.D. -0.5 N.D.
plant Atlantic +0.1 -0.0 N.D. -0.5 N.D.
plant Stem-Atlantic +0.2 -0.1 N.D. -0.4 N.D.
plant Stem-Upstate +0.4 +0.1 N.D. -0.8 N.D.
stress 3.75mM_PTB +0.1 +0.1 N.D. -0.4 N.D.
stress 3.75mM_PTB +0.2 +0.1 N.D. -0.4 N.D.
plant Upstate -0.2 -0.0 N.D. +0.2 N.D.
plant Stem-Upstate -0.2 -0.4 N.D. +0.7 N.D.
stress 1.88mM_PTB +0.0 -0.2 N.D. +0.3 N.D.
plant Upstate +0.2 +0.2 N.D. -0.2 N.D.
plant Stem-Norland +0.4 +0.0 N.D. -0.2 N.D.
plant Stem-Atlantic +0.2 -0.1 N.D. +0.2 N.D.
plant Norland -0.2 +0.2 N.D. +0.4 N.D.
control LB +0.1 -0.1 N.D. +0.5 N.D.
stress 1.88mM_PTB +0.1 +0.0 N.D. +0.6 N.D.
plant Norland +0.0 +0.2 N.D. +0.6 N.D.
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