Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS16865 and DZA65_RS16870 are separated by 777 nucleotidesDZA65_RS16870 and DZA65_RS16875 are separated by 348 nucleotidesDZA65_RS16875 and DZA65_RS16880 are separated by 27 nucleotidesDZA65_RS16880 and DZA65_RS16885 overlap by 1 nucleotides DZA65_RS16865: DZA65_RS16865 - sensor domain-containing diguanylate cyclase, at 3,644,530 to 3,646,047 _RS16865 DZA65_RS16870: DZA65_RS16870 - cyclic-guanylate-specific phosphodiesterase, at 3,646,825 to 3,647,616 _RS16870 DZA65_RS16875: DZA65_RS16875 - YfhL family 4Fe-4S dicluster ferredoxin, at 3,647,965 to 3,648,225 _RS16875 DZA65_RS16880: DZA65_RS16880 - holo-ACP synthase, at 3,648,253 to 3,648,633 _RS16880 DZA65_RS16885: DZA65_RS16885 - pyridoxine 5'-phosphate synthase, at 3,648,633 to 3,649,364 _RS16885
Group Condition DZA65_RS16865 DZA65_RS16870 DZA65_RS16875 DZA65_RS16880 DZA65_RS16885
plant Stem-Upstate +0.1 -1.4 -0.6 N.D. -0.8
plant Stem-Atlantic +0.2 -1.4 -0.2 N.D. -0.9
plant Stem-Upstate +0.4 -2.4 -0.2 N.D. -0.1
carbon source M9+sucrose -0.1 +0.3 -0.4 N.D. -2.1
plant Stem-Upstate +0.1 -0.8 -0.1 N.D. -1.1
plant Stem-Norland +0.1 -1.6 -0.4 N.D. +0.0
control LB +0.0 +0.2 -0.5 N.D. -1.5
carbon source M9+sucrose -0.1 +0.2 -0.1 N.D. -1.7
plant Stem-Norland +0.4 -2.1 +0.2 N.D. -0.1
control PDB -0.1 +0.1 -0.1 N.D. -1.5
carbon source M9+sucrose -0.0 +0.3 -0.2 N.D. -1.6
carbon source M9+polygalacturonate -0.2 +0.5 -0.1 N.D. -1.7
carbon source M9+polygalacturonate -0.1 +0.6 +0.1 N.D. -2.1
control PDB +0.3 -0.3 -0.2 N.D. -1.1
plant Stem-Atlantic +0.3 -1.2 +0.0 N.D. -0.5
plant Stem-Upstate +0.2 -1.7 +0.1 N.D. -0.0
control PDB +0.4 -0.3 -0.2 N.D. -1.2
carbon source M9+starch -0.1 +0.2 -0.3 N.D. -1.2
control PDB +0.4 -0.4 -0.2 N.D. -1.1
plant Stem-Atlantic +0.4 -1.4 -0.1 N.D. -0.2
control PDB -0.3 +0.2 +0.1 N.D. -1.2
plant Stem-Atlantic +0.5 -1.1 -0.2 N.D. -0.3
control LB -0.1 +0.4 -0.2 N.D. -1.2
plant Stem-Norland +0.6 -1.4 -0.0 N.D. -0.2
carbon source M9+starch -0.0 +0.4 -0.2 N.D. -1.2
carbon source M9+glycerol -0.3 +0.9 -0.4 N.D. -1.2
carbon source M9+polygalacturonate -0.1 +0.9 -0.0 N.D. -1.6
plant Stem-Norland +0.6 -1.4 -0.1 N.D. +0.3
carbon source M9+glycerol -0.1 +0.8 -0.3 N.D. -1.1
carbon source M9+glycerol -0.2 +0.9 +0.1 N.D. -0.8
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