Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS16840 and DZA65_RS16845 are separated by 24 nucleotidesDZA65_RS16845 and DZA65_RS16850 are separated by 151 nucleotidesDZA65_RS16850 and DZA65_RS16855 are separated by 721 nucleotidesDZA65_RS16855 and DZA65_RS16860 overlap by 14 nucleotides DZA65_RS16840: DZA65_RS16840 - tRNA adenosine(34) deaminase TadA, at 3,638,829 to 3,639,332 _RS16840 DZA65_RS16845: DZA65_RS16845 - N-acetylmuramic acid 6-phosphate etherase, at 3,639,357 to 3,640,280 _RS16845 DZA65_RS16850: DZA65_RS16850 - hypothetical protein, at 3,640,432 to 3,640,773 _RS16850 DZA65_RS16855: DZA65_RS16855 - type I secretion system permease/ATPase, at 3,641,495 to 3,643,681 _RS16855 DZA65_RS16860: DZA65_RS16860 - HlyD family efflux transporter periplasmic adaptor subunit, at 3,643,668 to 3,644,516 _RS16860
Group Condition DZA65_RS16840 DZA65_RS16845 DZA65_RS16850 DZA65_RS16855 DZA65_RS16860
carbon source M9+starch N.D. +0.0 -0.9 -0.0 -0.0
plant Stem-Upstate N.D. -0.1 -0.5 -0.1 -0.0
plant Stem-Norland N.D. -0.4 +0.2 -0.1 -0.4
plant Stem-Norland N.D. +0.5 -0.8 -0.2 -0.0
plant Atlantic N.D. +0.0 -0.6 +0.1 +0.0
control PDB N.D. -0.0 -0.6 +0.3 +0.0
carbon source M9+sucrose N.D. -0.3 +0.2 -0.1 -0.1
plant Stem-Atlantic N.D. +0.2 -0.4 +0.1 +0.0
control PDB N.D. -0.3 +0.3 -0.1 -0.1
plant Stem-Atlantic N.D. -0.2 -0.2 +0.1 +0.2
plant Stem-Norland N.D. -0.1 +0.6 -0.3 -0.3
plant Stem-Atlantic N.D. -0.1 +0.5 -0.2 -0.2
control LB N.D. -0.3 +0.5 -0.1 -0.1
control PDB N.D. -0.1 +0.4 -0.1 -0.1
plant Stem-Norland N.D. -0.4 +0.9 -0.4 +0.0
plant Stem-Norland N.D. -0.0 -0.2 +0.2 +0.2
control PDB N.D. -0.2 +0.5 +0.0 -0.1
plant Stem-Atlantic N.D. +0.3 -0.3 +0.1 +0.1
plant Stem-Atlantic N.D. +0.1 +0.7 -0.5 -0.1
plant Atlantic N.D. -0.2 +0.4 +0.2 -0.0
plant Stem-Norland N.D. +0.2 +0.8 -0.4 -0.2
plant Upstate N.D. -0.1 +0.4 +0.1 +0.1
plant Norland N.D. +0.0 +0.5 +0.2 -0.1
plant Stem-Upstate N.D. +0.8 -0.2 +0.2 -0.1
plant Stem-Upstate N.D. +0.5 +0.4 -0.2 -0.0
control PDB N.D. +0.0 +0.3 +0.3 +0.1
plant Upstate N.D. +0.1 +0.4 +0.2 +0.1
plant Stem-Upstate N.D. +0.3 +0.8 -0.3 +0.0
plant Stem-Upstate N.D. +0.4 +1.0 -0.4 -0.1
carbon source M9+glycerol N.D. +0.5 +0.3 +0.0 +0.1
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