Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS16720 and DZA65_RS16725 are separated by 55 nucleotidesDZA65_RS16725 and DZA65_RS16730 are separated by 129 nucleotidesDZA65_RS16730 and DZA65_RS16735 are separated by 126 nucleotidesDZA65_RS16735 and DZA65_RS16740 are separated by 162 nucleotides DZA65_RS16720: DZA65_RS16720 - cysteine desulfurase, at 3,607,059 to 3,608,273 _RS16720 DZA65_RS16725: DZA65_RS16725 - Fe-S cluster assembly transcriptional regulator IscR, at 3,608,329 to 3,608,823 _RS16725 DZA65_RS16730: DZA65_RS16730 - tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ, at 3,608,953 to 3,609,699 _RS16730 DZA65_RS16735: DZA65_RS16735 - inositol-1-monophosphatase, at 3,609,826 to 3,610,629 _RS16735 DZA65_RS16740: DZA65_RS16740 - ABC transporter substrate-binding protein, at 3,610,792 to 3,611,916 _RS16740
Group Condition DZA65_RS16720 DZA65_RS16725 DZA65_RS16730 DZA65_RS16735 DZA65_RS16740
plant Stem-Norland N.D. -1.7 -0.4 N.D. +0.0
plant Stem-Norland N.D. -1.4 -0.8 N.D. +0.2
plant Stem-Atlantic N.D. -1.2 -0.8 N.D. +0.0
plant Stem-Atlantic N.D. -1.6 -0.2 N.D. +0.1
carbon source M9+polygalacturonate N.D. -1.3 -0.2 N.D. -0.1
plant Stem-Atlantic N.D. -0.9 -0.5 N.D. -0.1
plant Stem-Upstate N.D. -0.9 -0.1 N.D. -0.3
plant Stem-Atlantic N.D. -1.0 -0.2 N.D. -0.1
plant Stem-Upstate N.D. -0.6 -0.5 N.D. -0.1
plant Atlantic N.D. -1.3 +0.0 N.D. +0.0
plant Stem-Norland N.D. -1.2 +0.0 N.D. -0.0
carbon source M9+glycerol N.D. -0.5 -0.5 N.D. -0.0
plant Stem-Norland N.D. -1.0 -0.0 N.D. -0.1
plant Stem-Norland N.D. -0.3 -0.8 N.D. +0.0
plant Stem-Norland N.D. -0.2 -0.8 N.D. -0.1
plant Stem-Atlantic N.D. -0.7 -0.3 N.D. +0.1
carbon source M9+polygalacturonate N.D. -0.7 -0.2 N.D. +0.0
plant Stem-Upstate N.D. -1.4 +0.7 N.D. -0.2
control LB N.D. -0.3 -0.5 N.D. +0.0
plant Stem-Norland N.D. -0.1 -0.9 N.D. +0.2
carbon source M9+starch N.D. -0.8 +0.1 N.D. +0.1
plant Atlantic N.D. -0.9 +0.2 N.D. +0.1
plant Upstate N.D. -0.7 +0.1 N.D. +0.1
plant Stem-Atlantic N.D. +0.4 -0.7 N.D. -0.0
stress 3.75mM_PTB N.D. -0.4 +0.5 N.D. -0.3
plant Upstate N.D. -0.3 +0.5 N.D. +0.1
control PDB N.D. +0.0 +0.6 N.D. -0.2
control PDB N.D. -0.1 +0.8 N.D. +0.1
plant Norland N.D. +0.2 +0.5 N.D. +0.0
plant Norland N.D. +0.6 +0.5 N.D. -0.0
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