Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS16635 and DZA65_RS16640 are separated by 10 nucleotidesDZA65_RS16640 and DZA65_RS16645 are separated by 13 nucleotidesDZA65_RS16645 and DZA65_RS16650 are separated by 134 nucleotidesDZA65_RS16650 and DZA65_RS16655 are separated by 36 nucleotides DZA65_RS16635: DZA65_RS16635 - outer membrane protein assembly factor BamB, at 3,591,261 to 3,592,442 _RS16635 DZA65_RS16640: DZA65_RS16640 - YfgM family protein, at 3,592,453 to 3,593,073 _RS16640 DZA65_RS16645: DZA65_RS16645 - histidine--tRNA ligase, at 3,593,087 to 3,594,361 _RS16645 DZA65_RS16650: DZA65_RS16650 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 3,594,496 to 3,595,617 _RS16650 DZA65_RS16655: DZA65_RS16655 - cytoskeleton protein RodZ, at 3,595,654 to 3,596,649 _RS16655
Group Condition DZA65_RS16635 DZA65_RS16640 DZA65_RS16645 DZA65_RS16650 DZA65_RS16655
plant Stem-Atlantic -1.4 -2.0 N.D. N.D. -0.6
plant Upstate -1.9 -0.8 N.D. N.D. -0.6
plant Stem-Upstate -1.5 -1.1 N.D. N.D. -0.5
plant Stem-Norland -2.0 -0.4 N.D. N.D. -0.7
plant Stem-Atlantic -1.4 -1.1 N.D. N.D. -0.4
plant Stem-Norland -1.6 -0.8 N.D. N.D. -0.2
plant Stem-Norland -1.5 -0.4 N.D. N.D. -0.7
plant Stem-Norland -1.3 -0.6 N.D. N.D. -0.7
plant Stem-Upstate -0.8 -1.1 N.D. N.D. -0.7
plant Stem-Norland -1.8 -0.5 N.D. N.D. +0.0
control PDB -1.4 -0.5 N.D. N.D. -0.3
plant Upstate -0.9 -0.8 N.D. N.D. -0.4
plant Atlantic -1.2 -0.3 N.D. N.D. -0.5
stress 3.75mM_PTB -1.1 -0.9 N.D. N.D. +0.2
carbon source M9+glycerol -1.8 +0.3 N.D. N.D. -0.3
plant Atlantic -1.2 -0.4 N.D. N.D. -0.2
plant Upstate -0.8 -0.7 N.D. N.D. -0.3
plant Stem-Upstate -0.7 -1.0 N.D. N.D. +0.1
plant Stem-Atlantic -1.6 -0.2 N.D. N.D. +0.3
stress 3.75mM_PTB -1.1 -0.7 N.D. N.D. +0.4
plant Stem-Upstate -1.3 -0.7 N.D. N.D. +0.7
control LB -1.6 +0.5 N.D. N.D. -0.1
control LB -1.1 -0.7 N.D. N.D. +0.6
carbon source M9+starch -1.4 +0.1 N.D. N.D. +0.2
carbon source M9+polygalacturonate -1.7 +0.3 N.D. N.D. +0.4
control LB -1.3 -0.2 N.D. N.D. +0.6
stress 3.75mM_PTB -1.0 -0.4 N.D. N.D. +0.5
control PDB -1.3 +0.4 N.D. N.D. +0.3
carbon source M9+glycerol -0.3 +0.8 N.D. N.D. -1.0
carbon source M9+glycerol -0.2 +0.8 N.D. N.D. -0.8
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