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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS16470 and DZA65_RS16475 are separated by 29 nucleotides
DZA65_RS16475 and DZA65_RS16480 are separated by 156 nucleotides
DZA65_RS16480 and DZA65_RS16485 overlap by 11 nucleotides
DZA65_RS16485 and DZA65_RS16490 overlap by 4 nucleotides
DZA65_RS16470: DZA65_RS16470 - terminase small subunit, at 3,567,882 to 3,568,538
_RS16470
DZA65_RS16475: DZA65_RS16475 - hypothetical protein, at 3,568,568 to 3,568,915
_RS16475
DZA65_RS16480: DZA65_RS16480 - hypothetical protein, at 3,569,072 to 3,569,329
_RS16480
DZA65_RS16485: DZA65_RS16485 - hypothetical protein, at 3,569,319 to 3,570,101
_RS16485
DZA65_RS16490: DZA65_RS16490 - hypothetical protein, at 3,570,098 to 3,570,334
_RS16490
Group
Condition
DZA65
_RS16470
DZA65
_RS16475
DZA65
_RS16480
DZA65
_RS16485
DZA65
_RS16490
plant
Stem-Upstate
-0.1
-0.4
-0.5
-0.0
-0.7
plant
Stem-Upstate
-0.3
-0.0
-0.5
+0.0
-0.4
plant
Stem-Norland
+0.1
-0.6
+0.0
-0.0
-0.4
stress
3.75mM_PTB
-0.1
-0.7
+0.0
+0.0
-0.1
control
LB
-0.1
-0.3
-0.4
-0.0
-0.0
plant
Stem-Upstate
+0.3
-0.6
-0.2
+0.0
-0.0
plant
Stem-Upstate
+0.1
-0.6
-0.1
+0.1
-0.0
control
LB
+0.1
-0.2
+0.1
-0.2
-0.2
plant
Norland
+0.1
-0.4
+0.1
+0.1
-0.2
stress
3.75mM_PTB
-0.2
-0.2
+0.3
-0.1
-0.0
plant
Stem-Atlantic
-0.1
-0.3
+0.0
+0.2
-0.1
carbon source
M9+sucrose
+0.1
-0.5
+0.0
-0.0
+0.2
plant
Upstate
-0.2
+0.0
+0.2
+0.1
-0.4
plant
Stem-Upstate
-0.0
-0.5
+0.4
-0.1
-0.0
control
PDB
+0.1
-0.4
+0.0
+0.2
-0.2
plant
Stem-Atlantic
-0.0
+0.4
-0.4
+0.1
-0.1
plant
Atlantic
+0.2
-0.5
+0.0
+0.1
+0.2
plant
Stem-Upstate
+0.3
-0.4
-0.2
+0.1
+0.2
plant
Stem-Norland
-0.2
-0.1
+0.1
-0.1
+0.3
stress
1.88mM_PTB
-0.2
+0.1
+0.3
-0.1
-0.1
carbon source
M9+glycerol
-0.1
+0.5
-0.0
-0.1
-0.3
plant
Stem-Norland
+0.1
-0.3
+0.2
-0.1
+0.2
carbon source
M9+starch
-0.1
+0.3
-0.1
-0.1
+0.1
plant
Stem-Norland
-0.1
+0.5
-0.3
+0.1
+0.0
plant
Stem-Norland
+0.2
+0.0
-0.3
+0.4
+0.1
plant
Stem-Norland
-0.1
-0.1
+0.6
-0.0
+0.2
carbon source
M9+glycerol
+0.1
+0.3
+0.1
-0.1
+0.1
plant
Upstate
-0.1
+0.2
+0.5
+0.1
+0.0
control
LB
+0.1
+0.4
+0.4
-0.1
+0.0
plant
Stem-Upstate
-0.1
+0.7
+0.2
+0.0
+0.2
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DZA65_RS16480
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