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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS16440 and DZA65_RS16445 are separated by 53 nucleotides
DZA65_RS16445 and DZA65_RS16450 overlap by 8 nucleotides
DZA65_RS16450 and DZA65_RS16455 overlap by 4 nucleotides
DZA65_RS16455 and DZA65_RS16460 are separated by 18 nucleotides
DZA65_RS16440: DZA65_RS16440 - peptidase, at 3,562,197 to 3,562,862
_RS16440
DZA65_RS16445: DZA65_RS16445 - hypothetical protein, at 3,562,916 to 3,563,731
_RS16445
DZA65_RS16450: DZA65_RS16450 - hypothetical protein, at 3,563,724 to 3,564,038
_RS16450
DZA65_RS16455: DZA65_RS16455 - phage tail protein, at 3,564,035 to 3,565,705
_RS16455
DZA65_RS16460: DZA65_RS16460 - hypothetical protein, at 3,565,724 to 3,565,930
_RS16460
Group
Condition
DZA65
_RS16440
DZA65
_RS16445
DZA65
_RS16450
DZA65
_RS16455
DZA65
_RS16460
plant
Stem-Norland
-0.3
-0.1
-0.3
+0.2
-2.0
plant
Stem-Norland
-0.2
+0.1
-0.1
+0.0
-2.3
control
LB
+0.3
-0.1
-0.6
-0.0
-1.0
stress
3.75mM_PTB
-1.1
+0.1
+0.1
+0.0
-0.2
stress
1.88mM_PTB
-1.2
+0.1
+0.2
+0.1
-0.0
plant
Upstate
-0.3
+0.0
-0.7
-0.1
+0.5
plant
Stem-Atlantic
-0.9
-0.1
+0.1
+0.0
+0.3
plant
Stem-Upstate
-1.3
+0.6
+0.2
+0.1
-0.1
plant
Upstate
-0.1
-0.1
-0.5
+0.0
+0.5
plant
Stem-Norland
+0.3
-0.0
+0.1
+0.1
-0.7
plant
Atlantic
-0.4
-0.0
-0.2
-0.0
+0.8
plant
Norland
-0.3
+0.0
-0.3
-0.0
+0.9
control
LB
-0.5
-0.0
+0.1
+0.1
+0.6
plant
Stem-Norland
-0.3
+0.1
-0.3
+0.1
+0.8
plant
Atlantic
+0.1
-0.1
-0.3
-0.0
+0.9
plant
Atlantic
-0.3
-0.1
-0.1
-0.1
+1.1
carbon source
M9+glycerol
+0.2
-0.1
-0.2
+0.0
+0.8
plant
Stem-Upstate
+0.4
+0.2
+0.5
-0.1
-0.2
plant
Stem-Upstate
+0.8
-0.4
+0.2
+0.2
+0.0
control
PDB
-0.2
-0.0
+0.2
+0.1
+0.8
plant
Upstate
+0.3
-0.1
-0.2
-0.0
+0.9
plant
Norland
+0.4
-0.1
-0.2
+0.0
+0.8
plant
Stem-Upstate
-0.1
-0.1
+0.2
+0.0
+1.0
plant
Norland
-0.2
+0.0
+0.3
+0.0
+0.9
plant
Upstate
+0.1
-0.0
-0.1
+0.1
+1.0
plant
Atlantic
+0.3
-0.0
-0.2
-0.1
+1.2
plant
Stem-Norland
-0.2
+0.1
+0.4
+0.0
+1.1
control
PDB
-0.1
+0.1
+0.0
+0.1
+1.5
carbon source
M9+glycerol
+0.2
+0.0
+0.1
+0.1
+1.2
control
PDB
+0.5
-0.2
+0.1
+0.1
+1.3
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