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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS16420 and DZA65_RS16425 are separated by 45 nucleotides
DZA65_RS16425 and DZA65_RS16430 are separated by 10 nucleotides
DZA65_RS16430 and DZA65_RS16435 are separated by 50 nucleotides
DZA65_RS16435 and DZA65_RS16440 are separated by 14 nucleotides
DZA65_RS16420: DZA65_RS16420 - hypothetical protein, at 3,559,957 to 3,560,280
_RS16420
DZA65_RS16425: DZA65_RS16425 - hypothetical protein, at 3,560,326 to 3,560,694
_RS16425
DZA65_RS16430: DZA65_RS16430 - hypothetical protein, at 3,560,705 to 3,561,145
_RS16430
DZA65_RS16435: DZA65_RS16435 - hypothetical protein, at 3,561,196 to 3,562,182
_RS16435
DZA65_RS16440: DZA65_RS16440 - peptidase, at 3,562,197 to 3,562,862
_RS16440
Group
Condition
DZA65
_RS16420
DZA65
_RS16425
DZA65
_RS16430
DZA65
_RS16435
DZA65
_RS16440
stress
3.75mM_PTB
-0.2
-0.1
+0.2
-0.0
-1.1
carbon source
M9+glycerol
-0.1
-0.3
-0.1
-0.1
-0.5
stress
1.88mM_PTB
+0.0
-0.1
+0.3
-0.1
-1.2
plant
Stem-Upstate
-0.1
+0.0
+0.1
+0.1
-1.3
carbon source
M9+polygalacturonate
-0.3
-0.1
+0.1
-0.1
-0.6
plant
Atlantic
-0.0
-0.1
-0.2
+0.1
-0.7
control
LB
-0.1
+0.1
-0.2
-0.1
-0.6
stress
3.75mM_PTB
-0.1
-0.6
+0.2
-0.0
-0.2
plant
Stem-Norland
+0.3
-0.5
-0.1
-0.2
-0.3
plant
Stem-Norland
-0.4
+0.2
-0.4
-0.1
-0.0
control
LB
-0.2
-0.6
+0.2
+0.0
-0.1
plant
Norland
+0.3
-1.0
-0.2
+0.0
+0.4
plant
Stem-Atlantic
+0.2
+0.2
-0.1
-0.0
-0.9
stress
1.88mM_PTB
-0.2
+0.1
+0.2
-0.2
-0.5
plant
Stem-Atlantic
+0.4
+0.4
-0.4
+0.0
-0.8
plant
Stem-Norland
-0.0
+0.1
-0.3
+0.3
-0.3
plant
Norland
+0.3
+0.2
-0.4
-0.0
-0.3
plant
Stem-Upstate
-0.0
+0.3
-0.6
+0.2
-0.1
control
PDB
+0.2
-0.3
+0.3
-0.1
-0.2
plant
Stem-Atlantic
+0.3
+0.5
-0.2
-0.0
-0.2
plant
Atlantic
+0.3
+0.3
+0.2
-0.1
-0.4
plant
Stem-Upstate
-0.1
+0.2
-0.3
+0.1
+0.4
plant
Stem-Norland
+0.2
+0.3
-0.1
+0.2
-0.2
plant
Atlantic
-0.0
+0.7
-0.2
-0.3
+0.3
plant
Stem-Upstate
+0.4
-0.5
-0.1
+0.1
+0.7
plant
Stem-Norland
-0.2
+0.8
+0.1
-0.1
+0.0
plant
Stem-Norland
-0.2
+1.1
-0.2
-0.2
+0.3
plant
Stem-Atlantic
+0.5
+0.2
-0.0
+0.1
+0.2
plant
Stem-Upstate
-0.0
+0.0
+0.1
+0.3
+0.8
plant
Upstate
+0.1
+0.6
+0.2
-0.0
+0.5
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DZA65_RS16430
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