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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS16075 and DZA65_RS16080 are separated by 154 nucleotides
DZA65_RS16080 and DZA65_RS16085 are separated by 243 nucleotides
DZA65_RS16085 and DZA65_RS16090 are separated by 152 nucleotides
DZA65_RS16090 and DZA65_RS16095 are separated by 16 nucleotides
DZA65_RS16075: DZA65_RS16075 - isochorismatase family protein, at 3,484,751 to 3,485,287
_RS16075
DZA65_RS16080: DZA65_RS16080 - tRNA-Ser, at 3,485,442 to 3,485,529
_RS16080
DZA65_RS16085: DZA65_RS16085 - FtsH protease modulator YccA, at 3,485,773 to 3,486,432
_RS16085
DZA65_RS16090: DZA65_RS16090 - sulfurtransferase TusE, at 3,486,585 to 3,486,914
_RS16090
DZA65_RS16095: DZA65_RS16095 - acylphosphatase, at 3,486,931 to 3,487,209
_RS16095
Group
Condition
DZA65
_RS16075
DZA65
_RS16080
DZA65
_RS16085
DZA65
_RS16090
DZA65
_RS16095
plant
Norland
+0.1
N.D.
+0.0
-3.8
-0.3
control
LB
-0.3
N.D.
-0.2
-3.0
-0.0
plant
Norland
+0.2
N.D.
+0.0
-3.3
-0.4
plant
Norland
+0.1
N.D.
-0.2
-3.0
-0.4
plant
Stem-Norland
-0.1
N.D.
+0.3
-3.4
-0.2
plant
Norland
-0.1
N.D.
+0.2
-3.5
+0.1
control
PDB
-0.0
N.D.
-0.0
-3.1
-0.2
plant
Atlantic
-0.0
N.D.
-0.1
-2.7
-0.4
plant
Stem-Atlantic
+0.2
N.D.
+0.0
-3.4
+0.0
carbon source
M9+sucrose
+0.1
N.D.
-0.1
-2.9
-0.2
plant
Stem-Upstate
+0.1
N.D.
-0.6
-2.1
-0.6
stress
1.88mM_PTB
+0.0
N.D.
-0.2
-2.8
-0.2
plant
Stem-Upstate
+0.1
N.D.
-0.1
-3.0
-0.2
plant
Upstate
+0.2
N.D.
+0.2
-3.6
+0.3
plant
Stem-Atlantic
-0.1
N.D.
+0.2
-3.5
+0.3
plant
Upstate
+0.2
N.D.
+0.0
-2.8
-0.3
plant
Upstate
+0.3
N.D.
-0.1
-3.1
-0.0
plant
Stem-Atlantic
+0.2
N.D.
+0.2
-3.4
+0.1
plant
Atlantic
-0.0
N.D.
+0.1
-2.9
-0.0
control
LB
+0.1
N.D.
+0.0
-2.8
-0.1
control
PDB
+0.2
N.D.
-0.2
-2.3
-0.4
plant
Stem-Atlantic
-0.0
N.D.
+0.3
-3.6
+0.7
carbon source
M9+sucrose
+0.1
N.D.
-0.1
-2.3
-0.4
plant
Norland
+0.2
N.D.
+0.1
-2.8
-0.2
stress
3.75mM_PTB
+0.2
N.D.
-0.1
-2.2
-0.5
plant
Stem-Atlantic
-0.2
N.D.
+0.1
-3.3
+0.9
plant
Stem-Norland
+0.1
N.D.
+0.1
-2.6
-0.1
plant
Stem-Norland
+0.3
N.D.
-0.1
-2.6
+0.0
plant
Stem-Norland
+0.2
N.D.
-0.1
-2.8
+0.3
plant
Upstate
+0.5
N.D.
-0.1
-2.3
-0.2
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