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Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS14975 and DZA65_RS14980 are separated by 117 nucleotides
DZA65_RS14980 and DZA65_RS14985 are separated by 15 nucleotides
DZA65_RS14985 and DZA65_RS14990 are separated by 635 nucleotides
DZA65_RS14990 and DZA65_RS14995 are separated by 1319 nucleotides
DZA65_RS14975: DZA65_RS14975 - NADH-quinone oxidoreductase subunit C/D, at 3,267,594 to 3,269,393
_RS14975
DZA65_RS14980: DZA65_RS14980 - NADH-quinone oxidoreductase subunit B, at 3,269,511 to 3,270,185
_RS14980
DZA65_RS14985: DZA65_RS14985 - NADH-quinone oxidoreductase subunit A, at 3,270,201 to 3,270,647
_RS14985
DZA65_RS14990: DZA65_RS14990 - transcriptional regulator LrhA, at 3,271,283 to 3,272,233
_RS14990
DZA65_RS14995: DZA65_RS14995 - pyridoxal phosphate-dependent aminotransferase, at 3,273,553 to 3,274,767
_RS14995
Group
Condition
DZA65
_RS14975
DZA65
_RS14980
DZA65
_RS14985
DZA65
_RS14990
DZA65
_RS14995
carbon source
M9+sucrose
N.D.
N.D.
N.D.
-1.4
+0.0
plant
Stem-Norland
N.D.
N.D.
N.D.
-1.4
+0.1
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-0.7
-0.3
carbon source
M9+sucrose
N.D.
N.D.
N.D.
-0.8
-0.1
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.9
+0.1
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-0.6
-0.2
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-0.5
-0.3
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.6
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-1.0
+0.3
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-1.0
+0.3
stress
3.75mM_PTB
N.D.
N.D.
N.D.
-0.4
-0.3
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.9
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.7
-0.0
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.8
+0.1
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.8
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.8
+0.2
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.7
+0.1
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.7
+0.1
plant
Stem-Atlantic
N.D.
N.D.
N.D.
-0.7
+0.1
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.6
+0.0
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.6
+0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.7
+0.2
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.6
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
-0.5
+0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.6
+0.3
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.6
+0.3
plant
Stem-Norland
N.D.
N.D.
N.D.
-0.5
+0.3
plant
Upstate
N.D.
N.D.
N.D.
-0.5
+0.3
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.5
+0.3
plant
Stem-Upstate
N.D.
N.D.
N.D.
-0.5
+0.4
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