Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS14525 and DZA65_RS14530 are separated by 107 nucleotidesDZA65_RS14530 and DZA65_RS14535 are separated by 119 nucleotidesDZA65_RS14535 and DZA65_RS14540 overlap by 18 nucleotidesDZA65_RS14540 and DZA65_RS14545 are separated by 14 nucleotides DZA65_RS14525: DZA65_RS14525 - IS3 family transposase, at 3,163,875 to 3,164,815 _RS14525 DZA65_RS14530: DZA65_RS14530 - alkene reductase, at 3,164,923 to 3,166,020 _RS14530 DZA65_RS14535: DZA65_RS14535 - LysR family transcriptional regulator, at 3,166,140 to 3,167,069 _RS14535 DZA65_RS14540: DZA65_RS14540 - SnoaL-like domain-containing protein, at 3,167,052 to 3,168,023 _RS14540 DZA65_RS14545: DZA65_RS14545 - TIGR03571 family LLM class oxidoreductase, at 3,168,038 to 3,169,018 _RS14545
Group Condition DZA65_RS14525 DZA65_RS14530 DZA65_RS14535 DZA65_RS14540 DZA65_RS14545
plant Norland -0.1 -0.0 -0.3 -0.2 -0.3
plant Norland -0.0 -0.1 -0.1 -0.2 -0.3
carbon source M9+polygalacturonate -0.2 -0.1 -0.1 -0.3 -0.1
carbon source M9+polygalacturonate -0.2 -0.0 -0.3 -0.1 +0.0
control PDB -0.1 +0.2 -0.5 -0.2 -0.1
control PDB -0.1 -0.1 -0.4 -0.0 +0.0
plant Atlantic -0.0 -0.0 -0.1 -0.1 -0.3
plant Upstate -0.1 +0.0 -0.2 -0.0 -0.3
carbon source M9+glycerol -0.0 -0.2 -0.2 +0.1 -0.1
carbon source M9+glycerol -0.1 -0.1 +0.0 -0.1 -0.2
plant Stem-Norland +0.1 +0.0 -0.1 -0.4 -0.1
plant Atlantic +0.0 +0.1 -0.1 +0.0 -0.3
plant Stem-Upstate +0.3 +0.1 -0.3 +0.0 -0.3
control PDB -0.0 +0.3 -0.2 -0.0 -0.1
plant Atlantic -0.1 +0.1 +0.1 +0.1 -0.2
plant Stem-Norland +0.1 +0.1 +0.1 +0.1 -0.3
plant Stem-Upstate +0.1 +0.1 -0.1 -0.1 +0.2
plant Stem-Upstate +0.1 +0.3 -0.4 +0.0 +0.2
plant Stem-Upstate +0.2 -0.0 -0.1 +0.2 +0.0
plant Stem-Norland -0.0 +0.1 +0.3 -0.0 -0.1
stress 1.88mM_PTB +0.2 -0.0 -0.1 +0.3 +0.0
stress 3.75mM_PTB +0.2 -0.1 -0.0 +0.0 +0.3
plant Stem-Atlantic +0.3 -0.1 +0.2 +0.0 -0.0
stress 3.75mM_PTB +0.2 -0.0 +0.1 +0.1 +0.1
control LB +0.0 +0.2 +0.1 +0.2 +0.1
plant Stem-Upstate +0.3 -0.0 +0.0 +0.3 +0.1
stress 1.88mM_PTB +0.1 +0.0 +0.3 +0.1 +0.2
plant Stem-Upstate +0.2 +0.1 +0.2 +0.1 +0.2
plant Stem-Norland +0.3 +0.1 +0.4 -0.0 +0.2
plant Stem-Upstate +0.0 +0.3 +0.3 +0.1 +0.4
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