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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS14085 and DZA65_RS14090 are separated by 133 nucleotides
DZA65_RS14090 and DZA65_RS14095 are separated by 2 nucleotides
DZA65_RS14095 and DZA65_RS14100 are separated by 1659 nucleotides
DZA65_RS14100 and DZA65_RS14105 are separated by 37 nucleotides
DZA65_RS14085: DZA65_RS14085 - flagellar motor stator protein MotA, at 3,021,660 to 3,022,547
_RS14085
DZA65_RS14090: DZA65_RS14090 - flagellar transcriptional regulator FlhC, at 3,022,681 to 3,023,259
_RS14090
DZA65_RS14095: DZA65_RS14095 - flagellar transcriptional regulator FlhD, at 3,023,262 to 3,023,612
_RS14095
DZA65_RS14100: DZA65_RS14100 - HAMP domain-containing protein, at 3,025,272 to 3,026,999
_RS14100
DZA65_RS14105: DZA65_RS14105 - protein DsrB, at 3,027,037 to 3,027,237
_RS14105
Group
Condition
DZA65
_RS14085
DZA65
_RS14090
DZA65
_RS14095
DZA65
_RS14100
DZA65
_RS14105
plant
Stem-Atlantic
-2.6
-3.7
-3.9
-0.2
-0.1
plant
Stem-Upstate
-3.2
-3.5
-2.4
-0.0
-0.2
plant
Stem-Atlantic
-2.9
-3.1
-2.8
-0.4
+0.3
plant
Stem-Atlantic
-2.6
-2.6
-3.1
+0.0
-0.1
plant
Stem-Norland
-2.5
-2.8
-2.9
-0.1
+0.5
plant
Stem-Atlantic
-2.6
-2.5
-2.8
-0.2
+0.6
plant
Stem-Upstate
-2.1
-3.0
-2.9
-0.1
+0.6
plant
Stem-Norland
-2.4
-2.5
-2.6
-0.0
+0.2
plant
Stem-Norland
-2.5
-2.5
-2.2
+0.1
+0.3
plant
Stem-Upstate
-2.4
-2.2
-2.0
+0.3
-0.5
plant
Stem-Norland
-2.2
-2.3
-2.3
+0.1
+0.2
plant
Stem-Atlantic
-2.0
-2.0
-2.7
+0.0
+0.5
plant
Stem-Norland
-2.3
-2.5
-2.0
+0.2
+0.8
plant
Stem-Atlantic
-2.1
-2.1
-2.1
+0.1
+0.5
plant
Stem-Norland
-1.9
-2.3
-2.3
+0.4
+0.5
plant
Stem-Upstate
-1.8
-1.5
-1.7
-0.0
-0.0
plant
Stem-Norland
-2.0
-1.4
-1.4
-0.0
+0.4
plant
Stem-Upstate
-1.9
-1.9
-1.0
+0.3
+0.4
plant
Stem-Norland
-1.3
-0.5
-1.2
-0.0
-0.4
plant
Stem-Atlantic
-1.3
-1.3
-0.6
+0.0
+0.3
plant
Stem-Upstate
-1.7
-0.8
-1.0
+0.4
+0.7
plant
Stem-Upstate
-1.1
-1.0
-0.3
+0.0
+1.1
carbon source
M9+polygalacturonate
+0.5
+1.3
+1.1
+0.1
-0.6
carbon source
M9+glycerol
+0.7
+0.9
+1.1
-0.1
+0.0
carbon source
M9+glycerol
+0.9
+0.9
+0.9
+0.0
+0.1
carbon source
M9+polygalacturonate
+0.7
+1.2
+1.2
+0.2
-0.3
carbon source
M9+glycerol
+0.8
+1.2
+1.1
+0.2
+0.0
carbon source
M9+polygalacturonate
+0.6
+1.4
+1.4
+0.0
-0.0
carbon source
M9+glycerol
+0.8
+1.3
+1.2
+0.2
-0.2
carbon source
M9+glycerol
+1.0
+1.4
+1.4
+0.2
-0.2
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