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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS14075 and DZA65_RS14080 are separated by 11 nucleotides
DZA65_RS14080 and DZA65_RS14085 overlap by 4 nucleotides
DZA65_RS14085 and DZA65_RS14090 are separated by 133 nucleotides
DZA65_RS14090 and DZA65_RS14095 are separated by 2 nucleotides
DZA65_RS14075: DZA65_RS14075 - chemotaxis protein CheA, at 3,018,497 to 3,020,521
_RS14075
DZA65_RS14080: DZA65_RS14080 - flagellar motor protein MotB, at 3,020,533 to 3,021,663
_RS14080
DZA65_RS14085: DZA65_RS14085 - flagellar motor stator protein MotA, at 3,021,660 to 3,022,547
_RS14085
DZA65_RS14090: DZA65_RS14090 - flagellar transcriptional regulator FlhC, at 3,022,681 to 3,023,259
_RS14090
DZA65_RS14095: DZA65_RS14095 - flagellar transcriptional regulator FlhD, at 3,023,262 to 3,023,612
_RS14095
Group
Condition
DZA65
_RS14075
DZA65
_RS14080
DZA65
_RS14085
DZA65
_RS14090
DZA65
_RS14095
plant
Stem-Atlantic
-3.0
-2.4
-2.6
-3.7
-3.9
plant
Stem-Atlantic
-2.9
-2.5
-2.9
-3.1
-2.8
plant
Stem-Upstate
-2.7
-2.2
-3.2
-3.5
-2.4
plant
Stem-Atlantic
-2.8
-2.4
-2.6
-2.6
-3.1
plant
Stem-Norland
-2.6
-2.2
-2.5
-2.8
-2.9
plant
Stem-Atlantic
-3.1
-1.9
-2.6
-2.5
-2.8
plant
Stem-Norland
-2.3
-2.6
-2.5
-2.5
-2.2
plant
Stem-Norland
-2.3
-2.1
-2.4
-2.5
-2.6
plant
Stem-Upstate
-2.1
-1.8
-2.1
-3.0
-2.9
plant
Stem-Upstate
-2.7
-2.3
-2.4
-2.2
-2.0
plant
Stem-Norland
-2.3
-2.4
-2.2
-2.3
-2.3
plant
Stem-Norland
-2.1
-2.1
-1.9
-2.3
-2.3
plant
Stem-Atlantic
-2.0
-1.9
-2.0
-2.0
-2.7
plant
Stem-Norland
-2.2
-1.5
-2.3
-2.5
-2.0
plant
Stem-Atlantic
-2.1
-1.9
-2.1
-2.1
-2.1
plant
Stem-Upstate
-2.3
-2.0
-1.9
-1.9
-1.0
plant
Stem-Norland
-1.9
-1.9
-2.0
-1.4
-1.4
plant
Stem-Upstate
-1.3
-1.6
-1.8
-1.5
-1.7
plant
Stem-Norland
-2.2
-1.2
-1.3
-0.5
-1.2
plant
Stem-Atlantic
-2.1
-1.0
-1.3
-1.3
-0.6
plant
Stem-Upstate
-1.4
-1.4
-1.1
-1.0
-0.3
plant
Stem-Upstate
-0.8
-0.8
-1.7
-0.8
-1.0
carbon source
M9+polygalacturonate
+0.2
+0.1
+0.7
+1.2
+1.2
carbon source
M9+polygalacturonate
+0.1
+0.0
+0.6
+1.4
+1.4
carbon source
M9+glycerol
+0.1
+0.9
+0.8
+0.8
+0.9
carbon source
M9+glycerol
+0.1
+0.7
+0.7
+0.9
+1.1
carbon source
M9+glycerol
+0.1
+0.8
+0.9
+0.9
+0.9
carbon source
M9+glycerol
+0.2
+0.6
+0.8
+1.2
+1.1
carbon source
M9+glycerol
+0.2
+0.7
+0.8
+1.3
+1.2
carbon source
M9+glycerol
+0.2
+0.9
+1.0
+1.4
+1.4
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