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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS14015 and DZA65_RS14020 are separated by 144 nucleotides
DZA65_RS14020 and DZA65_RS14025 are separated by 4 nucleotides
DZA65_RS14025 and DZA65_RS14030 are separated by 76 nucleotides
DZA65_RS14030 and DZA65_RS14035 are separated by 13 nucleotides
DZA65_RS14015: DZA65_RS14015 - flagellar basal body P-ring formation protein FlgA, at 3,006,918 to 3,007,586
_RS14015
DZA65_RS14020: DZA65_RS14020 - anti-sigma-28 factor FlgM, at 3,007,731 to 3,008,030
_RS14020
DZA65_RS14025: DZA65_RS14025 - flagella synthesis chaperone protein FlgN, at 3,008,035 to 3,008,472
_RS14025
DZA65_RS14030: DZA65_RS14030 - flagellar protein FlhE, at 3,008,549 to 3,008,971
_RS14030
DZA65_RS14035: DZA65_RS14035 - flagellar biosynthesis protein FlhA, at 3,008,985 to 3,011,072
_RS14035
Group
Condition
DZA65
_RS14015
DZA65
_RS14020
DZA65
_RS14025
DZA65
_RS14030
DZA65
_RS14035
plant
Stem-Atlantic
-3.5
N.D.
-3.6
-0.3
-3.4
plant
Stem-Atlantic
-3.8
N.D.
-3.2
+0.1
-3.5
plant
Stem-Atlantic
-3.3
N.D.
-3.1
+0.0
-3.6
plant
Stem-Norland
-3.2
N.D.
-2.7
-0.6
-3.2
plant
Stem-Atlantic
-3.2
N.D.
-3.4
+0.2
-3.3
plant
Stem-Upstate
-3.4
N.D.
-2.6
-0.1
-3.2
plant
Stem-Upstate
-3.1
N.D.
-2.5
-0.3
-2.9
plant
Stem-Norland
-3.3
N.D.
-3.0
+0.4
-2.8
plant
Stem-Atlantic
-2.4
N.D.
-2.9
-0.1
-2.9
plant
Stem-Norland
-2.6
N.D.
-2.3
-0.5
-3.0
plant
Stem-Norland
-2.4
N.D.
-2.9
-0.2
-2.7
plant
Stem-Upstate
-2.7
N.D.
-2.6
-0.2
-2.5
plant
Stem-Norland
-2.8
N.D.
-1.8
-0.3
-3.1
plant
Stem-Atlantic
-3.0
N.D.
-2.4
-0.1
-2.4
plant
Stem-Norland
-3.4
N.D.
-1.9
+0.2
-2.4
plant
Stem-Upstate
-2.5
N.D.
-1.6
+0.1
-2.7
plant
Stem-Norland
-2.0
N.D.
-2.2
-0.0
-2.2
plant
Stem-Atlantic
-1.8
N.D.
-2.4
-0.0
-1.9
plant
Stem-Upstate
-2.0
N.D.
-1.8
-0.6
-1.7
plant
Stem-Upstate
-1.7
N.D.
-1.9
-0.1
-1.8
plant
Stem-Upstate
-1.5
N.D.
-1.3
-0.2
-1.5
plant
Stem-Norland
-1.9
N.D.
-1.1
-0.2
-1.0
plant
Atlantic
-0.6
N.D.
-0.6
-0.7
-0.4
control
PDB
+0.5
N.D.
-1.1
-0.7
+0.3
control
PDB
+0.4
N.D.
-0.7
-0.6
+0.2
carbon source
M9+polygalacturonate
+0.8
N.D.
+0.3
-0.0
+0.8
carbon source
M9+polygalacturonate
+0.9
N.D.
+0.0
+0.1
+0.9
carbon source
M9+glycerol
+1.6
N.D.
-0.0
+0.2
+1.2
carbon source
M9+glycerol
+1.6
N.D.
+0.0
+0.2
+1.2
carbon source
M9+glycerol
+1.7
N.D.
+0.5
+0.2
+1.4
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