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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13995 and DZA65_RS14000 are separated by 66 nucleotides
DZA65_RS14000 and DZA65_RS14005 are separated by 12 nucleotides
DZA65_RS14005 and DZA65_RS14010 are separated by 33 nucleotides
DZA65_RS14010 and DZA65_RS14015 are separated by 167 nucleotides
DZA65_RS13995: DZA65_RS13995 - flagellar hook protein FlgE, at 3,003,943 to 3,005,142
_RS13995
DZA65_RS14000: DZA65_RS14000 - flagellar hook assembly protein FlgD, at 3,005,209 to 3,005,880
_RS14000
DZA65_RS14005: DZA65_RS14005 - flagellar basal body rod protein FlgC, at 3,005,893 to 3,006,297
_RS14005
DZA65_RS14010: DZA65_RS14010 - flagellar basal body rod protein FlgB, at 3,006,331 to 3,006,750
_RS14010
DZA65_RS14015: DZA65_RS14015 - flagellar basal body P-ring formation protein FlgA, at 3,006,918 to 3,007,586
_RS14015
Group
Condition
DZA65
_RS13995
DZA65
_RS14000
DZA65
_RS14005
DZA65
_RS14010
DZA65
_RS14015
plant
Stem-Atlantic
-3.7
-3.8
-3.5
-3.2
-3.3
plant
Stem-Upstate
-3.0
-3.4
-3.4
-3.1
-3.4
plant
Stem-Atlantic
-3.4
-3.5
-3.3
-2.8
-3.2
plant
Stem-Norland
-3.0
-3.6
-3.2
-2.5
-3.2
plant
Stem-Atlantic
-3.0
-3.5
-2.6
-2.4
-3.8
plant
Stem-Norland
-3.1
-3.0
-3.2
-3.2
-2.6
plant
Stem-Upstate
-2.9
-3.4
-2.8
-2.6
-3.1
plant
Stem-Atlantic
-3.1
-3.2
-2.7
-2.4
-3.5
plant
Stem-Norland
-3.0
-2.8
-3.2
-2.8
-2.8
plant
Stem-Norland
-2.4
-2.4
-2.2
-3.3
-3.4
plant
Stem-Atlantic
-2.7
-2.5
-2.8
-2.7
-3.0
plant
Stem-Norland
-3.1
-2.9
-1.9
-2.2
-3.3
plant
Stem-Atlantic
-2.6
-2.8
-3.1
-2.4
-2.4
plant
Stem-Upstate
-2.6
-2.4
-2.6
-2.6
-2.7
plant
Stem-Norland
-2.9
-2.4
-2.8
-2.4
-2.4
plant
Stem-Upstate
-2.6
-2.2
-2.3
-1.8
-2.5
plant
Stem-Atlantic
-2.1
-2.3
-1.7
-2.1
-1.8
plant
Stem-Norland
-1.8
-2.0
-2.5
-1.4
-2.0
plant
Stem-Upstate
-2.0
-1.6
-1.7
-1.9
-2.0
plant
Stem-Upstate
-1.9
-1.8
-1.3
-1.7
-1.7
plant
Stem-Upstate
-1.8
-1.5
-1.7
-1.8
-1.5
plant
Stem-Norland
-1.3
-1.3
-1.5
-1.6
-1.9
carbon source
M9+polygalacturonate
+0.4
+0.6
+0.7
+0.6
+0.7
carbon source
M9+polygalacturonate
+0.5
+0.5
+0.9
+0.5
+0.8
carbon source
M9+sucrose
+0.5
+0.6
+0.8
+0.7
+0.8
carbon source
M9+sucrose
+0.6
+0.6
+1.0
+0.5
+0.7
carbon source
M9+polygalacturonate
+0.6
+0.7
+0.8
+0.7
+0.9
carbon source
M9+glycerol
+1.4
+1.5
+1.3
+1.4
+1.6
carbon source
M9+glycerol
+1.5
+1.5
+1.5
+1.3
+1.6
carbon source
M9+glycerol
+1.5
+1.5
+1.5
+1.6
+1.7
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