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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS13960 and DZA65_RS13965 are separated by 32 nucleotides
DZA65_RS13965 and DZA65_RS13970 are separated by 126 nucleotides
DZA65_RS13970 and DZA65_RS13975 overlap by 1 nucleotides
DZA65_RS13975 and DZA65_RS13980 are separated by 16 nucleotides
DZA65_RS13960: DZA65_RS13960 - flagellar hook-filament junction protein FlgL, at 2,996,420 to 2,997,349
_RS13960
DZA65_RS13965: DZA65_RS13965 - flagellar hook-associated protein FlgK, at 2,997,382 to 2,999,304
_RS13965
DZA65_RS13970: DZA65_RS13970 - flagellar assembly peptidoglycan hydrolase FlgJ, at 2,999,431 to 3,000,381
_RS13970
DZA65_RS13975: DZA65_RS13975 - flagellar basal body P-ring protein FlgI, at 3,000,381 to 3,001,490
_RS13975
DZA65_RS13980: DZA65_RS13980 - flagellar basal body L-ring protein FlgH, at 3,001,507 to 3,002,223
_RS13980
Group
Condition
DZA65
_RS13960
DZA65
_RS13965
DZA65
_RS13970
DZA65
_RS13975
DZA65
_RS13980
plant
Stem-Atlantic
-3.1
-2.6
-3.2
-3.7
-3.6
plant
Stem-Atlantic
-3.2
-2.8
-2.8
-3.5
-3.4
plant
Stem-Atlantic
-3.0
-2.8
-2.7
-3.6
-3.2
plant
Stem-Upstate
-3.2
-2.7
-2.8
-3.3
-3.0
plant
Stem-Norland
-3.1
-2.7
-3.2
-2.8
-3.1
plant
Stem-Norland
-3.0
-2.5
-3.0
-3.2
-3.0
plant
Stem-Atlantic
-3.0
-2.4
-2.8
-3.1
-3.2
plant
Stem-Norland
-2.6
-2.9
-2.9
-3.1
-2.9
plant
Stem-Upstate
-2.8
-2.2
-2.6
-2.8
-3.2
plant
Stem-Norland
-2.6
-2.6
-2.4
-3.1
-2.5
plant
Stem-Atlantic
-2.9
-2.2
-2.3
-2.7
-2.7
plant
Stem-Atlantic
-2.8
-2.1
-2.3
-2.7
-2.6
plant
Stem-Norland
-2.5
-2.3
-2.2
-2.7
-2.9
plant
Stem-Upstate
-2.3
-2.1
-2.0
-3.0
-2.6
plant
Stem-Upstate
-2.1
-2.1
-2.1
-2.8
-2.6
plant
Stem-Norland
-2.4
-2.0
-1.9
-1.9
-2.1
plant
Stem-Atlantic
-2.1
-1.7
-2.0
-2.2
-2.1
plant
Stem-Norland
-2.1
-1.7
-2.0
-1.7
-2.1
plant
Stem-Upstate
-2.2
-2.0
-1.4
-2.0
-2.0
plant
Stem-Upstate
-1.8
-1.5
-1.7
-1.9
-1.8
plant
Stem-Upstate
-1.5
-1.6
-1.4
-1.8
-1.7
plant
Stem-Norland
-1.3
-1.2
-1.1
-2.5
-1.1
plant
Atlantic
-0.4
-0.3
-0.5
-0.7
-0.6
carbon source
M9+polygalacturonate
+0.1
+0.1
+0.6
+0.6
+0.5
control
LB
+0.2
+0.3
+0.6
+0.5
+0.5
control
LB
+0.2
+0.4
+0.6
+0.5
+0.5
carbon source
M9+polygalacturonate
+0.1
+0.2
+0.6
+0.8
+0.7
carbon source
M9+glycerol
+0.0
+0.1
+1.4
+1.5
+1.5
carbon source
M9+glycerol
+0.1
+0.1
+1.4
+1.4
+1.4
carbon source
M9+glycerol
+0.2
+0.2
+1.6
+1.6
+1.7
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